HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:183.5 nTPM
HPA:183.5 nTPM
GTEx:198.1 nTPM
FANTOM5:185.0 Scaled Tags Per Million
Pig:60.2 nTPM
Mouse:29.9 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017519
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 183.5
Sample id Sample description nTPM
Hippocampus
nTPM: 178.7
2529 Female, age 94, left hemisphere 192.6
1911 Female, age 85, right hemisphere 187.0
1855 Male, age 76, left hemisphere 185.6
2621 Female, age 67, right hemisphere 172.9
1898 Male, age 80, left hemisphere 167.7
2148 Female, age 91, left hemisphere 166.5
Dentate gyrus
nTPM: 178.2
2530 Female, age 94, left hemisphere 209.9
2010 Male, age 76, both hemispheres 196.2
2528 Male, age 74, both hemispheres 176.6
2246 Female, age 85, both hemispheres 169.7
2531 Female, age 67, both hemispheres 167.4
1927 Female, age 91, both hemispheres 149.6
Entorhinal gyrus
nTPM: 169.2
2117 Female, age 91, right hemisphere 192.3
2686 Male, age 75, right hemisphere 183.8
2764 Male, age 80, right hemisphere 167.2
1938 Female, age 85, left hemisphere 158.9
1787 Male, age 76, left hemisphere 158.6
2613 Female, age 94, left hemisphere 154.4
Hippocampus, CA1
nTPM: 165.9
2527 Male, age 74, both hemispheres 177.2
2082 Female, age 91, right hemisphere 172.2
1873 Female, age 85, both hemispheres 170.8
2045 Male, age 76, both hemispheres 163.5
2749 Male, age 80, left hemisphere 146.0
Hippocampus, CA2
nTPM: 171.3
2113 Female, age 91, right hemisphere 180.7
1963 Male, age 80, left hemisphere 180.5
2249 Male, age 74, both hemispheres 180.1
2437 Female, age 94, left hemisphere 169.6
1940 Female, age 85, left hemisphere 161.5
1892 Male, age 76, both hemispheres 155.2
Hippocampus, CA3
nTPM: 163.4
1891 Female, age 85, both hemispheres 192.3
1867 Male, age 76, both hemispheres 180.2
2620 Female, age 94, left hemisphere 155.1
2861 Female, age 67, both hemispheres 153.8
2436 Male, age 74, both hemispheres 151.2
2137 Male, age 80, left hemisphere 147.6
Parahippocampal cortex
nTPM: 163.5
2692 Male, age 74, both hemispheres 186.6
2018 Male, age 76, both hemispheres 184.9
2532 Female, age 72, left hemisphere 177.5
1990 Female, age 91, right hemisphere 163.8
2245 Female, age 91, both hemispheres 161.0
1933 Female, age 85, both hemispheres 157.8
1850 Male, age 80, both hemispheres 157.5
2622 Female, age 67, right hemisphere 157.3
2693 Female, age 94, both hemispheres 146.6
2250 Female, age 67, right hemisphere 142.1
Perirhinal gyrus
nTPM: 143.3
2848 Male, age 76, right hemisphere 149.8
2521 Female, age 94, right hemisphere 142.9
1794 Male, age 80, right hemisphere 142.8
1847 Female, age 91, left hemisphere 142.6
1841 Female, age 85, right hemisphere 138.6
Subiculum
nTPM: 183.5
2042 Male, age 76, both hemispheres 207.1
2438 Female, age 94, left hemisphere 187.3
1901 Male, age 80, both hemispheres 184.8
2729 Female, age 91, right hemisphere 178.0
2619 Male, age 74, both hemispheres 172.2
1977 Female, age 85, both hemispheres 171.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 198.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 198.1
Samples: 197

Max nTPM: 716.6
Min nTPM: 38.6
Std nTPM: 100.0
Median nTPM: 175.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 716.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 583.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 515.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 509.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 473.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 459.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 437.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 411.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 406.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 383.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 370.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 185.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.0
FF:10153-102I9 76 years, female 235.1
FF:10169-103B7 60 years, female 134.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.6
Samples: 4

Max nTPM: 84.5
Min nTPM: 40.0
Sample A Female 84.5
Sample B Female 50.9
Sample C Male 62.8
Sample D Male 40.0
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 78.5
Min nTPM: 44.5
Sample A Female 58.1
Sample B Female 78.5
Sample C Male 59.7
Sample D Male 44.5
Subiculum
nTPM: 32.1
Samples: 4

Max nTPM: 38.2
Min nTPM: 25.4
Sample A Female 38.2
Sample B Female 31.3
Sample C Male 25.4
Sample D Male 33.3
Ventral hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 51.5
Min nTPM: 30.2
Sample A Female 41.8
Sample B Female 30.2
Sample C Male 39.8
Sample D Male 51.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.4
Samples: 4

Max nTPM: 33.6
Min nTPM: 25.9
Sample A Male 33.6
Sample B Male 26.8
Sample C Female 31.4
Sample D Female 25.9
Hippocampal formation
nTPM: 30.0
Samples: 4

Max nTPM: 31.0
Min nTPM: 28.4
Sample A Male 31.0
Sample B Male 28.4
Sample C Female 30.1
Sample D Female 30.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
79556599 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 14.8
79360312 Antisense, RP_071018_02_A06, Mouse strain C57BL/6J (56 days, male) 11.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.