HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.0 nTPM
HPA:57.0 nTPM
GTEx:46.7 nTPM
FANTOM5:89.9 Scaled Tags Per Million
Pig:38.2 nTPM
Mouse:29.8 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010948
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.0
Sample id Sample description nTPM
Hippocampus
nTPM: 57.0
2529 Female, age 94, left hemisphere 66.3
2148 Female, age 91, left hemisphere 61.8
1898 Male, age 80, left hemisphere 56.9
1855 Male, age 76, left hemisphere 54.4
1911 Female, age 85, right hemisphere 54.2
2621 Female, age 67, right hemisphere 48.5
Dentate gyrus
nTPM: 52.2
2528 Male, age 74, both hemispheres 66.3
2246 Female, age 85, both hemispheres 54.0
2530 Female, age 94, left hemisphere 51.1
2010 Male, age 76, both hemispheres 49.5
2531 Female, age 67, both hemispheres 47.5
1927 Female, age 91, both hemispheres 44.8
Entorhinal gyrus
nTPM: 53.8
2117 Female, age 91, right hemisphere 69.0
1787 Male, age 76, left hemisphere 53.4
2686 Male, age 75, right hemisphere 52.9
2764 Male, age 80, right hemisphere 52.8
1938 Female, age 85, left hemisphere 50.0
2613 Female, age 94, left hemisphere 44.7
Hippocampus, CA1
nTPM: 53.2
2082 Female, age 91, right hemisphere 65.5
2527 Male, age 74, both hemispheres 64.8
1873 Female, age 85, both hemispheres 54.0
2045 Male, age 76, both hemispheres 45.1
2749 Male, age 80, left hemisphere 36.8
Hippocampus, CA2
nTPM: 52.3
2113 Female, age 91, right hemisphere 63.3
2249 Male, age 74, both hemispheres 62.1
2437 Female, age 94, left hemisphere 51.2
1940 Female, age 85, left hemisphere 49.6
1963 Male, age 80, left hemisphere 47.9
1892 Male, age 76, both hemispheres 39.8
Hippocampus, CA3
nTPM: 50.0
1891 Female, age 85, both hemispheres 54.5
2861 Female, age 67, both hemispheres 54.2
2436 Male, age 74, both hemispheres 52.6
2620 Female, age 94, left hemisphere 52.4
1867 Male, age 76, both hemispheres 44.2
2137 Male, age 80, left hemisphere 42.0
Parahippocampal cortex
nTPM: 49.4
2692 Male, age 74, both hemispheres 57.5
1933 Female, age 85, both hemispheres 53.3
2250 Female, age 67, right hemisphere 52.0
1850 Male, age 80, both hemispheres 49.7
2245 Female, age 91, both hemispheres 49.7
1990 Female, age 91, right hemisphere 49.6
2018 Male, age 76, both hemispheres 49.0
2622 Female, age 67, right hemisphere 45.2
2693 Female, age 94, both hemispheres 44.8
2532 Female, age 72, left hemisphere 43.2
Perirhinal gyrus
nTPM: 51.4
2848 Male, age 76, right hemisphere 57.7
1847 Female, age 91, left hemisphere 56.8
2521 Female, age 94, right hemisphere 48.9
1841 Female, age 85, right hemisphere 47.1
1794 Male, age 80, right hemisphere 46.7
Subiculum
nTPM: 55.4
2729 Female, age 91, right hemisphere 72.8
2619 Male, age 74, both hemispheres 60.3
1977 Female, age 85, both hemispheres 53.1
2438 Female, age 94, left hemisphere 51.8
2042 Male, age 76, both hemispheres 47.5
1901 Male, age 80, both hemispheres 46.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.7
Samples: 197

Max nTPM: 128.2
Min nTPM: 19.1
Std nTPM: 16.4
Median nTPM: 44.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 128.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 105.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 94.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 86.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 81.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 81.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 80.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 80.1
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 77.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 76.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 75.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.9
FF:10153-102I9 76 years, female 113.8
FF:10169-103B7 60 years, female 65.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 15.9
Sample A Female 17.2
Sample B Female 19.7
Sample C Male 25.4
Sample D Male 15.9
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 31.8
Min nTPM: 17.8
Sample A Female 30.9
Sample B Female 17.8
Sample C Male 31.8
Sample D Male 19.2
Subiculum
nTPM: 38.2
Samples: 4

Max nTPM: 41.3
Min nTPM: 35.7
Sample A Female 41.3
Sample B Female 35.7
Sample C Male 39.2
Sample D Male 36.6
Ventral hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 49.7
Min nTPM: 16.5
Sample A Female 28.0
Sample B Female 24.1
Sample C Male 49.7
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 40.5
Min nTPM: 23.8
Sample A Male 25.7
Sample B Male 23.8
Sample C Female 29.3
Sample D Female 40.5
Hippocampal formation
nTPM: 27.1
Samples: 4

Max nTPM: 28.8
Min nTPM: 25.6
Sample A Male 26.1
Sample B Male 28.8
Sample C Female 27.9
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71608207 Antisense, RP_050927_01_B03, Mouse strain C57BL/6J (56 days, male) 1.9
654928 Antisense, RP_040922_01_B02, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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