HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.9 nTPM
HPA:7.9 nTPM
GTEx:6.4 nTPM
FANTOM5:51.4 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:12.3 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058931
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.9
Sample id Sample description nTPM
Hippocampus
nTPM: 7.2
2529 Female, age 94, left hemisphere 9.7
2148 Female, age 91, left hemisphere 8.3
1911 Female, age 85, right hemisphere 7.9
2621 Female, age 67, right hemisphere 7.4
1898 Male, age 80, left hemisphere 6.1
1855 Male, age 76, left hemisphere 3.5
Dentate gyrus
nTPM: 5.8
2528 Male, age 74, both hemispheres 6.9
2531 Female, age 67, both hemispheres 6.4
1927 Female, age 91, both hemispheres 6.0
2010 Male, age 76, both hemispheres 5.9
2530 Female, age 94, left hemisphere 5.1
2246 Female, age 85, both hemispheres 4.3
Entorhinal gyrus
nTPM: 6.9
2686 Male, age 75, right hemisphere 10.3
2117 Female, age 91, right hemisphere 10.1
1787 Male, age 76, left hemisphere 6.8
1938 Female, age 85, left hemisphere 5.3
2764 Male, age 80, right hemisphere 4.9
2613 Female, age 94, left hemisphere 4.3
Hippocampus, CA1
nTPM: 4.7
1873 Female, age 85, both hemispheres 6.7
2082 Female, age 91, right hemisphere 6.7
2527 Male, age 74, both hemispheres 6.6
2045 Male, age 76, both hemispheres 2.6
2749 Male, age 80, left hemisphere 0.7
Hippocampus, CA2
nTPM: 5.4
2249 Male, age 74, both hemispheres 7.7
1963 Male, age 80, left hemisphere 7.1
2113 Female, age 91, right hemisphere 5.7
2437 Female, age 94, left hemisphere 5.6
1940 Female, age 85, left hemisphere 4.3
1892 Male, age 76, both hemispheres 1.8
Hippocampus, CA3
nTPM: 5.0
1891 Female, age 85, both hemispheres 9.4
2861 Female, age 67, both hemispheres 6.9
2436 Male, age 74, both hemispheres 5.1
1867 Male, age 76, both hemispheres 3.7
2620 Female, age 94, left hemisphere 3.7
2137 Male, age 80, left hemisphere 1.2
Parahippocampal cortex
nTPM: 6.3
2018 Male, age 76, both hemispheres 8.3
2692 Male, age 74, both hemispheres 7.2
1933 Female, age 85, both hemispheres 6.7
1990 Female, age 91, right hemisphere 6.6
2245 Female, age 91, both hemispheres 6.6
1850 Male, age 80, both hemispheres 6.4
2250 Female, age 67, right hemisphere 6.4
2622 Female, age 67, right hemisphere 5.4
2693 Female, age 94, both hemispheres 4.8
2532 Female, age 72, left hemisphere 4.7
Perirhinal gyrus
nTPM: 5.3
1841 Female, age 85, right hemisphere 7.3
1847 Female, age 91, left hemisphere 6.1
1794 Male, age 80, right hemisphere 4.6
2848 Male, age 76, right hemisphere 4.4
2521 Female, age 94, right hemisphere 4.0
Subiculum
nTPM: 7.9
2729 Female, age 91, right hemisphere 9.0
2619 Male, age 74, both hemispheres 8.7
2042 Male, age 76, both hemispheres 8.3
1977 Female, age 85, both hemispheres 8.1
2438 Female, age 94, left hemisphere 6.9
1901 Male, age 80, both hemispheres 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.4
Samples: 197

Max nTPM: 11.8
Min nTPM: 3.1
Std nTPM: 1.7
Median nTPM: 6.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 11.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 11.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 10.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 10.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 9.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 9.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 9.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 9.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 9.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 9.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.4
FF:10153-102I9 76 years, female 65.3
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 33.8
Min nTPM: 27.9
Sample A Female 33.8
Sample B Female 29.6
Sample C Male 32.3
Sample D Male 27.9
Entorhinal cortex
nTPM: 22.6
Samples: 4

Max nTPM: 24.8
Min nTPM: 20.2
Sample A Female 21.9
Sample B Female 24.8
Sample C Male 23.3
Sample D Male 20.2
Subiculum
nTPM: 26.3
Samples: 4

Max nTPM: 30.0
Min nTPM: 23.5
Sample A Female 30.0
Sample B Female 25.5
Sample C Male 23.5
Sample D Male 26.0
Ventral hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 28.5
Min nTPM: 24.9
Sample A Female 28.5
Sample B Female 27.2
Sample C Male 24.9
Sample D Male 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 12.5
Min nTPM: 11.8
Sample A Male 12.5
Sample B Male 11.8
Sample C Female 12.3
Sample D Female 12.0
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.1
Min nTPM: 11.6
Sample A Male 12.7
Sample B Male 13.1
Sample C Female 11.9
Sample D Female 11.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75831749 Antisense, RP_060601_02_C10, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.