HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:17.5 nTPM
HPA:17.5 nTPM
GTEx:23.5 nTPM
FANTOM5:33.4 Scaled Tags Per Million
Pig:9.4 nTPM
Mouse:9.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
2529 Female, age 94, left hemisphere 18.7
1911 Female, age 85, right hemisphere 13.4
2621 Female, age 67, right hemisphere 11.4
2148 Female, age 91, left hemisphere 7.6
1898 Male, age 80, left hemisphere 7.0
1855 Male, age 76, left hemisphere 4.6
Dentate gyrus
nTPM: 11.7
2530 Female, age 94, left hemisphere 21.4
2010 Male, age 76, both hemispheres 15.1
2528 Male, age 74, both hemispheres 12.0
2246 Female, age 85, both hemispheres 9.8
2531 Female, age 67, both hemispheres 8.5
1927 Female, age 91, both hemispheres 3.4
Entorhinal gyrus
nTPM: 16.8
2117 Female, age 91, right hemisphere 29.1
2764 Male, age 80, right hemisphere 23.9
1787 Male, age 76, left hemisphere 15.8
2686 Male, age 75, right hemisphere 11.4
2613 Female, age 94, left hemisphere 11.3
1938 Female, age 85, left hemisphere 9.4
Hippocampus, CA1
nTPM: 7.4
2082 Female, age 91, right hemisphere 15.5
2527 Male, age 74, both hemispheres 12.6
1873 Female, age 85, both hemispheres 7.1
2749 Male, age 80, left hemisphere 2.0
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 14.3
2249 Male, age 74, both hemispheres 18.6
2113 Female, age 91, right hemisphere 17.5
2437 Female, age 94, left hemisphere 17.4
1940 Female, age 85, left hemisphere 15.2
1963 Male, age 80, left hemisphere 14.1
1892 Male, age 76, both hemispheres 2.8
Hippocampus, CA3
nTPM: 7.8
1891 Female, age 85, both hemispheres 19.0
2436 Male, age 74, both hemispheres 13.4
1867 Male, age 76, both hemispheres 7.1
2620 Female, age 94, left hemisphere 4.4
2861 Female, age 67, both hemispheres 2.7
2137 Male, age 80, left hemisphere 0.2
Parahippocampal cortex
nTPM: 13.1
2532 Female, age 72, left hemisphere 22.2
1990 Female, age 91, right hemisphere 18.6
2692 Male, age 74, both hemispheres 17.7
2018 Male, age 76, both hemispheres 16.9
1850 Male, age 80, both hemispheres 11.7
2245 Female, age 91, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.5
1933 Female, age 85, both hemispheres 10.4
2622 Female, age 67, right hemisphere 6.5
2250 Female, age 67, right hemisphere 5.9
Perirhinal gyrus
nTPM: 9.5
2848 Male, age 76, right hemisphere 12.8
1794 Male, age 80, right hemisphere 11.0
2521 Female, age 94, right hemisphere 10.6
1841 Female, age 85, right hemisphere 7.4
1847 Female, age 91, left hemisphere 5.8
Subiculum
nTPM: 17.5
2042 Male, age 76, both hemispheres 26.4
1901 Male, age 80, both hemispheres 21.5
1977 Female, age 85, both hemispheres 18.8
2619 Male, age 74, both hemispheres 14.6
2438 Female, age 94, left hemisphere 13.4
2729 Female, age 91, right hemisphere 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.5
Samples: 197

Max nTPM: 82.3
Min nTPM: 3.9
Std nTPM: 13.4
Median nTPM: 20.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 82.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 71.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 61.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 56.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 52.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 52.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 52.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 51.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 51.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 51.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.4
FF:10153-102I9 76 years, female 42.9
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 10.4
Min nTPM: 3.8
Sample A Female 8.3
Sample B Female 5.3
Sample C Male 10.4
Sample D Male 3.8
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.6
Sample A Female 9.0
Sample B Female 7.6
Sample C Male 7.7
Sample D Male 7.9
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 11.7
Min nTPM: 7.2
Sample A Female 11.7
Sample B Female 7.2
Sample C Male 8.8
Sample D Male 9.9
Ventral hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 13.0
Min nTPM: 5.7
Sample A Female 8.6
Sample B Female 5.7
Sample C Male 13.0
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 12.7
Min nTPM: 6.4
Sample A Male 12.7
Sample B Male 6.4
Sample C Female 7.2
Sample D Female 9.6
Hippocampal formation
nTPM: 8.4
Samples: 4

Max nTPM: 10.5
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 7.5
Sample C Female 9.1
Sample D Female 10.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68162203 Antisense, RP_041122_01_G01, Mouse strain C57BL/6J (56 days, male) 0.4

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