COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.3 nTPM
HPA:6.8 nTPM
GTEx:28.3 nTPM
FANTOM5:25.2 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 6.8
overview
Male, age 54 		Colon sample 67
nTPM: 6.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 4.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 16.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 9.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 5.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.8
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 4.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 28.3
Samples: 373

Max nTPM: 172.9
Min nTPM: 2.6
Std nTPM: 17.7
Median nTPM: 23.4
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 172.9
GTEX-1A3MV-1026-SM-72D5U 30-39 years, male 116.2
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 90.7
GTEX-ZF2S-1826-SM-4WKFF 50-59 years, female 86.6
GTEX-1RAZQ-2026-SM-E76P7 30-39 years, male 83.0
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 81.7
GTEX-18A6Q-2226-SM-7LG61 60-69 years, male 78.4
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 75.0
GTEX-1HCUA-1926-SM-B2LWE 50-59 years, female 74.5
GTEX-1J1OQ-2826-SM-D3L88 40-49 years, female 74.5
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 73.3
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Colon - Transverse
Average nTPM: 18.5
Samples: 406

Max nTPM: 94.0
Min nTPM: 3.0
Std nTPM: 14.7
Median nTPM: 14.0
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 94.0
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 87.7
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 77.4
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 73.5
GTEX-1EH9U-2026-SM-7PBYS 60-69 years, male 73.0
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 71.3
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 67.0
GTEX-15DZA-0926-SM-69LQ3 30-39 years, female 65.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 65.3
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 65.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 64.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 25.2
FF:10014-101C5 62,83,84 years, mixed 25.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.