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RBP2
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  • RBP2
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Endocrine cells: High
Enterocytes: High
Enterocytes - Gradient: Ascending
Enterocytes - Microvilli: High
Goblet cells: Not detected
Paneth cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1886.7 nTPM
HPA:1886.7 nTPM
GTEx:278.7 nTPM
FANTOM5:3607.3 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA035866
Endocrine cells High
Enterocytes High
Enterocytes - Gradient Ascending
Enterocytes - Microvilli High
Goblet cells Not detected
Paneth cells Not detected


SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1886.7
overview
Male, age 65
Small intestine sample 232
nTPM: 3420.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 482.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1885.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1757.8

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 278.7
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 278.7
Samples: 187

Max nTPM: 2014.4
Min nTPM: 0.0
Std nTPM: 381.4
Median nTPM: 93.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 2014.4
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1469.5
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1402.7
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1366.4
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1355.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1347.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1211.5
GTEX-YFCO-1326-SM-664NV 40-49 years, male 1192.0
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1164.3
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1151.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1102.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 1071.3
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1043.0
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 992.4
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 966.0
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 933.6
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 901.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 884.6
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 874.4
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 833.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 814.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 800.1
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 749.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 696.0
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 676.8
GTEX-13113-1226-SM-5EGHT 60-69 years, female 670.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 663.9
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 658.3
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 657.1
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 650.1
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 642.6
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 619.1
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 613.5
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 598.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 573.3
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 564.9
GTEX-14PN3-2026-SM-68729 60-69 years, female 549.0
GTEX-14PKU-1626-SM-6871C 40-49 years, female 541.7
GTEX-13O61-1326-SM-5KM31 60-69 years, male 537.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 533.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 531.0
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 515.5
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 511.9
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 507.6
GTEX-14PK6-1626-SM-6871I 70-79 years, female 501.3
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 473.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 460.0
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 411.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 405.6
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 397.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 384.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 383.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 359.5
GTEX-ZTSS-0926-SM-59865 40-49 years, male 354.0
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 344.0
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 335.1
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 330.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 324.7
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 322.6
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 319.3
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 311.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 311.0
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 296.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 294.5
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 292.2
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 281.1
GTEX-1C475-1426-SM-793CH 40-49 years, female 265.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 257.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 243.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 232.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 209.1
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 202.2
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 194.7
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 182.2
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 181.0
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 173.6
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 167.7
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 165.5
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 162.5
GTEX-144GM-1026-SM-79OKU 20-29 years, male 154.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 149.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 147.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 141.0
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 140.5
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 140.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 124.2
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 121.4
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 115.0
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 112.5
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 107.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 101.0
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 100.2
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 94.1
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 93.4
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 90.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 89.3
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 83.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 77.0
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 61.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 59.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 56.3
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 53.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 50.8
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 48.9
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 48.3
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 41.5
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 40.9
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 37.9
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 36.9
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 33.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 31.8
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 31.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 31.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 28.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 28.9
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 28.6
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 28.5
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 24.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 21.4
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 21.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 19.8
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 18.8
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 18.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 17.7
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 16.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 16.4
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 15.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 15.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 13.0
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 12.6
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 11.9
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 10.6
GTEX-1192X-2526-SM-59868 50-59 years, male 10.5
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 10.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 9.7
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 8.4
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 8.2
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 8.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 8.1
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 7.7
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 7.7
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 7.6
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 7.5
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 7.2
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 7.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 6.9
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 6.3
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 6.3
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 6.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 5.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 5.8
GTEX-117YX-0326-SM-5GICL 50-59 years, male 5.6
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 5.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 5.0
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 3.9
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 3.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 3.0
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 2.8
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 2.7
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2.6
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 2.4
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 2.3
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 2.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 2.3
GTEX-13111-1426-SM-5DUW3 50-59 years, male 2.2
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 2.2
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 2.2
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 2.0
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1.7
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1.7
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1.7
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1.6
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1.3
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1.1
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 0.9
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 0.9
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 0.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 0.6
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 0.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 0.4
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 0.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 0.1
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 0.0
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 3607.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 3607.3
FF:10024-101D6 15,40,85 years, mixed 3607.3

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