HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.6 nTPM
HPA:37.6 nTPM
GTEx:48.8 nTPM
FANTOM5:29.5 Scaled Tags Per Million
Pig:9.2 nTPM
Mouse:21.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048286
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.6
Sample id Sample description nTPM
Hippocampus
nTPM: 31.1
1898 Male, age 80, left hemisphere 35.5
2529 Female, age 94, left hemisphere 31.3
1855 Male, age 76, left hemisphere 30.5
2148 Female, age 91, left hemisphere 30.3
2621 Female, age 67, right hemisphere 30.3
1911 Female, age 85, right hemisphere 28.6
Dentate gyrus
nTPM: 31.1
1927 Female, age 91, both hemispheres 33.6
2010 Male, age 76, both hemispheres 32.3
2246 Female, age 85, both hemispheres 30.9
2530 Female, age 94, left hemisphere 30.2
2531 Female, age 67, both hemispheres 30.0
2528 Male, age 74, both hemispheres 29.3
Entorhinal gyrus
nTPM: 33.6
2613 Female, age 94, left hemisphere 37.1
1938 Female, age 85, left hemisphere 35.5
2764 Male, age 80, right hemisphere 35.1
1787 Male, age 76, left hemisphere 33.8
2686 Male, age 75, right hemisphere 31.1
2117 Female, age 91, right hemisphere 29.4
Hippocampus, CA1
nTPM: 33.1
2749 Male, age 80, left hemisphere 39.2
2527 Male, age 74, both hemispheres 34.5
1873 Female, age 85, both hemispheres 32.1
2045 Male, age 76, both hemispheres 30.4
2082 Female, age 91, right hemisphere 29.5
Hippocampus, CA2
nTPM: 32.3
1892 Male, age 76, both hemispheres 36.4
2249 Male, age 74, both hemispheres 35.4
1963 Male, age 80, left hemisphere 34.2
2437 Female, age 94, left hemisphere 29.6
1940 Female, age 85, left hemisphere 29.3
2113 Female, age 91, right hemisphere 29.0
Hippocampus, CA3
nTPM: 32.1
2137 Male, age 80, left hemisphere 35.0
1867 Male, age 76, both hemispheres 34.2
2436 Male, age 74, both hemispheres 32.4
2620 Female, age 94, left hemisphere 31.8
1891 Female, age 85, both hemispheres 30.6
2861 Female, age 67, both hemispheres 28.2
Parahippocampal cortex
nTPM: 33.0
1850 Male, age 80, both hemispheres 39.8
1990 Female, age 91, right hemisphere 35.1
1933 Female, age 85, both hemispheres 33.6
2245 Female, age 91, both hemispheres 32.8
2692 Male, age 74, both hemispheres 32.7
2693 Female, age 94, both hemispheres 32.0
2250 Female, age 67, right hemisphere 31.8
2018 Male, age 76, both hemispheres 30.8
2532 Female, age 72, left hemisphere 30.7
2622 Female, age 67, right hemisphere 30.4
Perirhinal gyrus
nTPM: 37.6
1794 Male, age 80, right hemisphere 40.1
1847 Female, age 91, left hemisphere 39.6
1841 Female, age 85, right hemisphere 39.0
2521 Female, age 94, right hemisphere 35.0
2848 Male, age 76, right hemisphere 34.1
Subiculum
nTPM: 32.3
1901 Male, age 80, both hemispheres 34.6
1977 Female, age 85, both hemispheres 34.5
2438 Female, age 94, left hemisphere 33.8
2619 Male, age 74, both hemispheres 31.2
2729 Female, age 91, right hemisphere 30.0
2042 Male, age 76, both hemispheres 29.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.8
Samples: 197

Max nTPM: 149.1
Min nTPM: 15.1
Std nTPM: 20.6
Median nTPM: 43.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 149.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 120.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 105.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 104.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 103.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 100.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 99.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 96.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 93.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 90.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 88.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.5
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 23.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.5
Sample A Female 9.6
Sample B Female 9.2
Sample C Male 9.3
Sample D Male 8.5
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.8
Sample A Female 6.5
Sample B Female 8.1
Sample C Male 5.8
Sample D Male 7.3
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.7
Sample A Female 6.9
Sample B Female 5.7
Sample C Male 7.3
Sample D Male 5.7
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.4
Sample A Female 7.8
Sample B Female 6.7
Sample C Male 5.4
Sample D Male 8.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 22.2
Min nTPM: 19.5
Sample A Male 21.8
Sample B Male 22.2
Sample C Female 22.2
Sample D Female 19.5
Hippocampal formation
nTPM: 21.8
Samples: 4

Max nTPM: 25.7
Min nTPM: 19.9
Sample A Male 25.7
Sample B Male 19.9
Sample C Female 20.7
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
100146097 Antisense, RP_110421_02_B05, Mouse strain C57BL/6J (56 days, male) 0.5
77414919 Antisense, RP_070205_01_G08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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