HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.0 nTPM
HPA:18.0 nTPM
GTEx:12.8 nTPM
FANTOM5:18.6 Scaled Tags Per Million
Pig:5.5 nTPM
Mouse:1.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.0
2529 Female, age 94, left hemisphere 18.5
2148 Female, age 91, left hemisphere 18.3
1855 Male, age 76, left hemisphere 18.1
1898 Male, age 80, left hemisphere 17.9
1911 Female, age 85, right hemisphere 17.7
2621 Female, age 67, right hemisphere 17.1
Dentate gyrus
nTPM: 16.4
2530 Female, age 94, left hemisphere 18.0
2528 Male, age 74, both hemispheres 17.2
2010 Male, age 76, both hemispheres 17.0
2246 Female, age 85, both hemispheres 16.1
1927 Female, age 91, both hemispheres 15.6
2531 Female, age 67, both hemispheres 14.7
Entorhinal gyrus
nTPM: 15.2
2117 Female, age 91, right hemisphere 17.2
1787 Male, age 76, left hemisphere 15.3
2686 Male, age 75, right hemisphere 15.0
1938 Female, age 85, left hemisphere 14.9
2764 Male, age 80, right hemisphere 14.9
2613 Female, age 94, left hemisphere 13.7
Hippocampus, CA1
nTPM: 16.1
2527 Male, age 74, both hemispheres 17.8
1873 Female, age 85, both hemispheres 16.9
2045 Male, age 76, both hemispheres 16.3
2082 Female, age 91, right hemisphere 16.3
2749 Male, age 80, left hemisphere 13.4
Hippocampus, CA2
nTPM: 16.2
1940 Female, age 85, left hemisphere 17.5
2437 Female, age 94, left hemisphere 17.0
2113 Female, age 91, right hemisphere 16.5
2249 Male, age 74, both hemispheres 15.9
1963 Male, age 80, left hemisphere 15.8
1892 Male, age 76, both hemispheres 14.5
Hippocampus, CA3
nTPM: 16.5
2861 Female, age 67, both hemispheres 19.0
1867 Male, age 76, both hemispheres 17.3
2436 Male, age 74, both hemispheres 17.1
1891 Female, age 85, both hemispheres 16.9
2620 Female, age 94, left hemisphere 15.1
2137 Male, age 80, left hemisphere 13.8
Parahippocampal cortex
nTPM: 15.2
2018 Male, age 76, both hemispheres 17.3
2692 Male, age 74, both hemispheres 17.0
2622 Female, age 67, right hemisphere 16.9
2250 Female, age 67, right hemisphere 15.3
1933 Female, age 85, both hemispheres 14.7
1990 Female, age 91, right hemisphere 14.3
2245 Female, age 91, both hemispheres 14.3
2693 Female, age 94, both hemispheres 14.2
2532 Female, age 72, left hemisphere 14.0
1850 Male, age 80, both hemispheres 13.8
Perirhinal gyrus
nTPM: 13.7
1847 Female, age 91, left hemisphere 14.0
1794 Male, age 80, right hemisphere 13.9
1841 Female, age 85, right hemisphere 13.9
2848 Male, age 76, right hemisphere 13.8
2521 Female, age 94, right hemisphere 13.2
Subiculum
nTPM: 16.9
2729 Female, age 91, right hemisphere 20.2
2042 Male, age 76, both hemispheres 18.9
2619 Male, age 74, both hemispheres 16.5
2438 Female, age 94, left hemisphere 16.1
1901 Male, age 80, both hemispheres 15.4
1977 Female, age 85, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 30.5
Min nTPM: 4.2
Std nTPM: 4.1
Median nTPM: 12.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 30.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 24.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 24.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 24.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 20.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 20.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 20.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 20.4
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 19.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.6
FF:10153-102I9 76 years, female 21.5
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.8
Sample A Female 6.0
Sample B Female 4.8
Sample C Male 6.1
Sample D Male 5.0
Entorhinal cortex
nTPM: 4.9
Samples: 4

Max nTPM: 5.5
Min nTPM: 4.1
Sample A Female 4.9
Sample B Female 5.5
Sample C Male 5.0
Sample D Male 4.1
Subiculum
nTPM: 5.5
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.1
Sample A Female 6.0
Sample B Female 5.5
Sample C Male 5.5
Sample D Male 5.1
Ventral hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.6
Sample A Female 4.6
Sample B Female 4.7
Sample C Male 6.8
Sample D Male 5.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.7
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.2
Sample A Male 2.6
Sample B Male 1.3
Sample C Female 1.8
Sample D Female 1.2
Hippocampal formation
nTPM: 1.8
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.2
Sample A Male 1.2
Sample B Male 1.4
Sample C Female 2.1
Sample D Female 2.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69549253 Antisense, RP_050126_01_E02, Mouse strain C57BL/6J (56 days, male) 0.5

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