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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:34.0 nTPM
HPA:34.0 nTPM
GTEx:25.5 nTPM
FANTOM5:35.2 Scaled Tags Per Million
Pig:22.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 32.1
2194 Female, age 79, both hemispheres 35.6
2816 Male, age 47, midline 34.8
1981 Female, age 72, midline 31.0
2048 Male, age 55, midline 30.0
2565 Male, age 75, midline 29.0
Cervical spinal cord, dorsal horn
nTPM: 34.0
2721 Male, age 90, both hemispheres 36.7
2296 Male, age 66, both hemispheres 36.5
2173 Female, age 72, unknown 33.6
2297 Male, age 75, both hemispheres 33.5
2069 Male, age 47, both hemispheres 32.3
1877 Male, age 55, unknown 31.5
Cervical spinal cord, ventral horn
nTPM: 32.6
2820 Female, age 79, both hemispheres 40.0
2068 Male, age 55, unknown 38.5
2480 Male, age 75, both hemispheres 30.5
2098 Female, age 72, unknown 29.5
2295 Male, age 66, both hemispheres 28.8
2809 Male, age 90, both hemispheres 28.6

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 25.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 25.5
Samples: 159

Max nTPM: 57.1
Min nTPM: 8.3
Std nTPM: 7.3
Median nTPM: 24.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 57.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 46.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 44.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 44.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 41.6
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 41.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 39.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 39.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 39.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 38.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 38.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 37.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 37.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 36.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 35.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 35.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 34.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 34.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 33.3
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 32.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 32.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 32.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 32.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 31.9
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 31.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 31.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 31.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 31.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 31.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 30.9
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 30.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 30.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 30.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 30.8
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 30.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 30.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 30.5
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 30.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 30.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 29.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 29.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 29.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 29.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 29.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 28.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 28.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 28.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 28.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 28.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 27.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 27.4
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 27.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 27.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 27.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 27.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 27.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 27.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 27.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 26.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 26.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 26.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 26.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 26.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 26.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 26.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 26.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 26.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 25.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 25.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 25.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 25.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 25.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 25.2
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 25.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 24.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 24.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 24.4
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 24.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 24.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 24.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 24.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 24.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 24.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 24.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 23.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 23.8
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 23.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 23.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 23.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 23.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 23.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 23.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 23.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 22.9
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 22.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 22.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 22.8
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 22.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 22.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 22.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 22.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 22.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 22.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 22.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 22.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 22.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 22.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 22.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 22.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 21.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 21.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 21.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 21.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 21.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 21.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 21.5
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 21.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 21.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 21.2
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 21.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 21.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 20.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 20.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 20.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 20.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 20.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 20.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 20.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 20.0
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 19.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 19.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 19.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 19.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 19.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 19.1
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 19.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 18.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 18.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 18.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 18.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 18.3
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 18.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 18.1
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 17.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 16.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 16.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 16.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 16.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 15.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 15.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 15.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 14.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 14.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 13.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 12.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 12.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 12.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 10.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 8.3
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 35.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 35.2
FF:10159-103A6 76 years, female 41.3
FF:10181-103D1 60 years, female 29.1

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 22.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 17.4
Samples: 4

Max nTPM: 22.7
Min nTPM: 11.6
Sample A Female 22.7
Sample B Female 14.8
Sample C Male 11.6
Sample D Male 20.5
Ventral spinal cord
nTPM: 22.4
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.5
Sample A Female 24.4
Sample B Female 22.7
Sample C Male 22.8
Sample D Male 19.5

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