HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:90.7 nTPM
HPA:90.7 nTPM
GTEx:95.8 nTPM
FANTOM5:511.2 Scaled Tags Per Million
Pig:113.2 nTPM
Mouse:215.0 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.7
Sample id Sample description nTPM
Hippocampus
nTPM: 84.0
1898 Male, age 80, left hemisphere 94.1
2621 Female, age 67, right hemisphere 86.5
2529 Female, age 94, left hemisphere 85.1
1855 Male, age 76, left hemisphere 84.5
1911 Female, age 85, right hemisphere 77.7
2148 Female, age 91, left hemisphere 76.0
Dentate gyrus
nTPM: 85.0
2530 Female, age 94, left hemisphere 91.7
2010 Male, age 76, both hemispheres 89.5
1927 Female, age 91, both hemispheres 88.9
2246 Female, age 85, both hemispheres 85.2
2531 Female, age 67, both hemispheres 78.2
2528 Male, age 74, both hemispheres 76.4
Entorhinal gyrus
nTPM: 81.8
2764 Male, age 80, right hemisphere 87.2
1938 Female, age 85, left hemisphere 86.1
1787 Male, age 76, left hemisphere 83.7
2613 Female, age 94, left hemisphere 83.7
2686 Male, age 75, right hemisphere 75.0
2117 Female, age 91, right hemisphere 74.9
Hippocampus, CA1
nTPM: 87.1
2749 Male, age 80, left hemisphere 105.0
1873 Female, age 85, both hemispheres 87.3
2527 Male, age 74, both hemispheres 82.5
2045 Male, age 76, both hemispheres 81.8
2082 Female, age 91, right hemisphere 78.8
Hippocampus, CA2
nTPM: 84.2
1892 Male, age 76, both hemispheres 94.6
1963 Male, age 80, left hemisphere 86.9
2249 Male, age 74, both hemispheres 86.7
1940 Female, age 85, left hemisphere 80.4
2437 Female, age 94, left hemisphere 79.7
2113 Female, age 91, right hemisphere 76.9
Hippocampus, CA3
nTPM: 84.9
2137 Male, age 80, left hemisphere 94.8
1867 Male, age 76, both hemispheres 91.6
2620 Female, age 94, left hemisphere 85.0
1891 Female, age 85, both hemispheres 82.3
2436 Male, age 74, both hemispheres 78.4
2861 Female, age 67, both hemispheres 77.0
Parahippocampal cortex
nTPM: 84.8
1850 Male, age 80, both hemispheres 92.1
2245 Female, age 91, both hemispheres 90.4
2250 Female, age 67, right hemisphere 88.8
2532 Female, age 72, left hemisphere 88.2
1990 Female, age 91, right hemisphere 86.6
1933 Female, age 85, both hemispheres 85.7
2693 Female, age 94, both hemispheres 83.1
2018 Male, age 76, both hemispheres 82.2
2692 Male, age 74, both hemispheres 75.7
2622 Female, age 67, right hemisphere 75.6
Perirhinal gyrus
nTPM: 90.7
1847 Female, age 91, left hemisphere 96.9
1794 Male, age 80, right hemisphere 94.1
1841 Female, age 85, right hemisphere 91.9
2521 Female, age 94, right hemisphere 88.9
2848 Male, age 76, right hemisphere 81.8
Subiculum
nTPM: 83.9
1901 Male, age 80, both hemispheres 89.5
2042 Male, age 76, both hemispheres 88.9
1977 Female, age 85, both hemispheres 88.2
2438 Female, age 94, left hemisphere 82.4
2619 Male, age 74, both hemispheres 81.2
2729 Female, age 91, right hemisphere 72.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.8
Samples: 197

Max nTPM: 189.3
Min nTPM: 44.3
Std nTPM: 26.6
Median nTPM: 92.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 189.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 163.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 160.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 154.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 153.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 152.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 148.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 146.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 143.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 142.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 141.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 511.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 511.2
FF:10169-103B7 60 years, female 646.6
FF:10153-102I9 76 years, female 375.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 113.2
Samples: 4

Max nTPM: 150.1
Min nTPM: 92.4
Sample A Female 150.1
Sample B Female 115.0
Sample C Male 95.2
Sample D Male 92.4
Entorhinal cortex
nTPM: 107.5
Samples: 4

Max nTPM: 121.6
Min nTPM: 92.8
Sample A Female 121.6
Sample B Female 119.2
Sample C Male 92.8
Sample D Male 96.5
Subiculum
nTPM: 102.6
Samples: 4

Max nTPM: 138.0
Min nTPM: 87.5
Sample A Female 138.0
Sample B Female 96.7
Sample C Male 88.1
Sample D Male 87.5
Ventral hippocampus
nTPM: 93.3
Samples: 4

Max nTPM: 119.2
Min nTPM: 70.9
Sample A Female 82.2
Sample B Female 70.9
Sample C Male 101.0
Sample D Male 119.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 215.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 181.6
Samples: 4

Max nTPM: 190.5
Min nTPM: 173.7
Sample A Male 173.7
Sample B Male 187.1
Sample C Female 190.5
Sample D Female 175.0
Hippocampal formation
nTPM: 215.0
Samples: 4

Max nTPM: 225.5
Min nTPM: 204.6
Sample A Male 225.5
Sample B Male 210.5
Sample C Female 219.2
Sample D Female 204.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
75651231 Antisense, RP_060518_01_D09, Mouse strain C57BL/6J (56 days, male) 2.0
74357596 Antisense, RP_060117_01_A11, Mouse strain C57BL/6J (56 days, male) 1.4

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