HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.6 nTPM
HPA:20.6 nTPM
GTEx:11.8 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:33.7 nTPM
Mouse:18.7 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033276
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.6
Sample id Sample description nTPM
Hippocampus
nTPM: 3.0
2148 Female, age 91, left hemisphere 5.6
1898 Male, age 80, left hemisphere 5.4
2621 Female, age 67, right hemisphere 3.3
1855 Male, age 76, left hemisphere 3.2
1911 Female, age 85, right hemisphere 0.8
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 4.8
1927 Female, age 91, both hemispheres 10.5
2531 Female, age 67, both hemispheres 7.1
2246 Female, age 85, both hemispheres 6.7
2528 Male, age 74, both hemispheres 4.4
2010 Male, age 76, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 12.6
2613 Female, age 94, left hemisphere 24.7
2686 Male, age 75, right hemisphere 14.2
2764 Male, age 80, right hemisphere 13.7
1938 Female, age 85, left hemisphere 10.6
1787 Male, age 76, left hemisphere 7.9
2117 Female, age 91, right hemisphere 4.3
Hippocampus, CA1
nTPM: 7.2
2749 Male, age 80, left hemisphere 9.6
2082 Female, age 91, right hemisphere 8.7
2527 Male, age 74, both hemispheres 7.5
2045 Male, age 76, both hemispheres 7.2
1873 Female, age 85, both hemispheres 2.8
Hippocampus, CA2
nTPM: 4.9
1892 Male, age 76, both hemispheres 9.3
2249 Male, age 74, both hemispheres 6.4
2113 Female, age 91, right hemisphere 6.1
2437 Female, age 94, left hemisphere 5.0
1940 Female, age 85, left hemisphere 2.2
1963 Male, age 80, left hemisphere 0.7
Hippocampus, CA3
nTPM: 6.7
2620 Female, age 94, left hemisphere 11.6
2137 Male, age 80, left hemisphere 8.5
2436 Male, age 74, both hemispheres 7.0
1867 Male, age 76, both hemispheres 6.5
2861 Female, age 67, both hemispheres 4.2
1891 Female, age 85, both hemispheres 2.5
Parahippocampal cortex
nTPM: 12.3
2693 Female, age 94, both hemispheres 21.2
1850 Male, age 80, both hemispheres 18.9
2622 Female, age 67, right hemisphere 16.9
1990 Female, age 91, right hemisphere 15.7
2250 Female, age 67, right hemisphere 12.3
2245 Female, age 91, both hemispheres 10.5
1933 Female, age 85, both hemispheres 9.0
2692 Male, age 74, both hemispheres 8.1
2532 Female, age 72, left hemisphere 7.5
2018 Male, age 76, both hemispheres 3.1
Perirhinal gyrus
nTPM: 20.6
2521 Female, age 94, right hemisphere 26.3
1847 Female, age 91, left hemisphere 26.2
1794 Male, age 80, right hemisphere 20.7
2848 Male, age 76, right hemisphere 15.3
1841 Female, age 85, right hemisphere 14.6
Subiculum
nTPM: 4.9
1977 Female, age 85, both hemispheres 9.9
2438 Female, age 94, left hemisphere 7.8
1901 Male, age 80, both hemispheres 5.3
2619 Male, age 74, both hemispheres 5.3
2729 Female, age 91, right hemisphere 1.3
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 31.5
Min nTPM: 1.4
Std nTPM: 6.3
Median nTPM: 10.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 31.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 29.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 27.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 26.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 26.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 25.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 25.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 25.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10169-103B7 60 years, female 70.1
FF:10153-102I9 76 years, female 37.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 17.8
Sample A Female 28.1
Sample B Female 26.8
Sample C Male 34.9
Sample D Male 17.8
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 40.3
Min nTPM: 29.7
Sample A Female 32.2
Sample B Female 40.3
Sample C Male 29.7
Sample D Male 32.6
Subiculum
nTPM: 28.0
Samples: 4

Max nTPM: 33.6
Min nTPM: 23.6
Sample A Female 33.6
Sample B Female 23.6
Sample C Male 28.7
Sample D Male 26.0
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.2
Sample A Female 21.0
Sample B Female 17.2
Sample C Male 24.0
Sample D Male 24.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.6
Sample A Male 20.8
Sample B Male 17.2
Sample C Female 16.6
Sample D Female 20.4
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 20.1
Min nTPM: 14.1
Sample A Male 16.1
Sample B Male 19.8
Sample C Female 20.1
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
69514768 Antisense, RP_050419_04_A07, Mouse strain C57BL/6J (56 days, male) 14.4
69527704 Antisense, RP_050421_02_C01, Mouse strain C57BL/6J (56 days, male) 4.0
72340236 Antisense, RP_051101_02_B12, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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