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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:137.9 nTPM
HPA:137.9 nTPM
GTEx:199.3 nTPM
FANTOM5:685.0 Scaled Tags Per Million
Pig:134.5 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 137.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 128.4
2565 Male, age 75, midline 142.5
2194 Female, age 79, both hemispheres 133.3
2048 Male, age 55, midline 125.7
2816 Male, age 47, midline 123.9
1981 Female, age 72, midline 116.6
Cervical spinal cord, dorsal horn
nTPM: 117.7
2296 Male, age 66, both hemispheres 127.3
1877 Male, age 55, unknown 122.4
2069 Male, age 47, both hemispheres 119.5
2173 Female, age 72, unknown 118.7
2297 Male, age 75, both hemispheres 110.6
2721 Male, age 90, both hemispheres 107.6
Cervical spinal cord, ventral horn
nTPM: 137.9
2480 Male, age 75, both hemispheres 171.3
2809 Male, age 90, both hemispheres 150.4
2295 Male, age 66, both hemispheres 135.3
2820 Female, age 79, both hemispheres 127.8
2068 Male, age 55, unknown 126.0
2098 Female, age 72, unknown 116.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 199.3
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 199.3
Samples: 159

Max nTPM: 338.4
Min nTPM: 108.6
Std nTPM: 41.5
Median nTPM: 194.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 338.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 321.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 317.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 309.8
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 304.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 296.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 281.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 278.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 277.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 271.2
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 263.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 262.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 258.3
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 257.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 253.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 252.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 248.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 248.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 247.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 246.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 244.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 243.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 243.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 243.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 240.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 240.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 238.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 237.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 236.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 236.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 230.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 230.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 229.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 228.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 228.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 227.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 226.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 226.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 225.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 225.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 223.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 223.8
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 223.7
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 223.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 223.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 219.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 216.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 215.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 211.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 211.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 210.0
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 209.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 209.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 208.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 207.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 207.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 206.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 205.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 204.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 203.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 203.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 203.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 203.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 203.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 203.0
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 203.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 202.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 202.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 200.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 200.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 199.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 198.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 198.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 197.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 196.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 196.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 196.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 195.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 194.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 194.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 194.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 194.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 193.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 192.9
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 191.0
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 191.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 189.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 189.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 189.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 188.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 186.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 185.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 185.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 185.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 184.8
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 184.3
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 183.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 183.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 183.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 183.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 182.9
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 182.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 182.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 180.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 180.6
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 180.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 179.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 179.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 176.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 176.2
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 175.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 173.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 172.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 172.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 172.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 172.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 171.9
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 170.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 168.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 168.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 167.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 166.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 166.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 166.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 165.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 165.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 164.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 164.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 164.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 163.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 161.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 161.6
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 161.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 161.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 160.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 160.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 159.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 157.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 157.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 154.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 154.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 154.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 152.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 152.2
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 151.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 150.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 149.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 149.5
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 148.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 148.6
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 146.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 145.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 143.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 139.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 131.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 126.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 116.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 113.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 108.6
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 685.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 685.0
FF:10159-103A6 76 years, female 787.6
FF:10181-103D1 60 years, female 582.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 134.5
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 129.3
Samples: 4

Max nTPM: 138.0
Min nTPM: 108.8
Sample A Female 108.8
Sample B Female 137.3
Sample C Male 138.0
Sample D Male 133.2
Ventral spinal cord
nTPM: 134.5
Samples: 4

Max nTPM: 155.5
Min nTPM: 124.4
Sample A Female 124.4
Sample B Female 125.8
Sample C Male 132.2
Sample D Male 155.5

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