HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:60.6 nTPM
HPA:60.6 nTPM
GTEx:56.6 nTPM
FANTOM5:24.8 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:153.3 nTPM
Allen mouse:21.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.6
Sample id Sample description nTPM
Hippocampus
nTPM: 57.1
1898 Male, age 80, left hemisphere 63.9
2148 Female, age 91, left hemisphere 59.0
2621 Female, age 67, right hemisphere 57.3
1855 Male, age 76, left hemisphere 56.9
1911 Female, age 85, right hemisphere 52.9
2529 Female, age 94, left hemisphere 52.5
Dentate gyrus
nTPM: 59.3
2530 Female, age 94, left hemisphere 66.5
1927 Female, age 91, both hemispheres 63.4
2528 Male, age 74, both hemispheres 58.3
2531 Female, age 67, both hemispheres 57.7
2010 Male, age 76, both hemispheres 56.2
2246 Female, age 85, both hemispheres 54.0
Entorhinal gyrus
nTPM: 58.9
2613 Female, age 94, left hemisphere 66.3
2764 Male, age 80, right hemisphere 60.7
1787 Male, age 76, left hemisphere 59.8
2686 Male, age 75, right hemisphere 57.6
1938 Female, age 85, left hemisphere 55.4
2117 Female, age 91, right hemisphere 53.4
Hippocampus, CA1
nTPM: 58.7
2749 Male, age 80, left hemisphere 68.9
1873 Female, age 85, both hemispheres 58.6
2082 Female, age 91, right hemisphere 57.0
2527 Male, age 74, both hemispheres 54.8
2045 Male, age 76, both hemispheres 53.9
Hippocampus, CA2
nTPM: 60.6
1963 Male, age 80, left hemisphere 67.0
1892 Male, age 76, both hemispheres 65.1
2437 Female, age 94, left hemisphere 61.7
1940 Female, age 85, left hemisphere 57.6
2249 Male, age 74, both hemispheres 56.2
2113 Female, age 91, right hemisphere 55.7
Hippocampus, CA3
nTPM: 58.8
2861 Female, age 67, both hemispheres 61.8
2137 Male, age 80, left hemisphere 61.1
2620 Female, age 94, left hemisphere 60.7
2436 Male, age 74, both hemispheres 58.4
1867 Male, age 76, both hemispheres 56.9
1891 Female, age 85, both hemispheres 53.6
Parahippocampal cortex
nTPM: 56.7
1850 Male, age 80, both hemispheres 61.4
1990 Female, age 91, right hemisphere 59.1
2622 Female, age 67, right hemisphere 58.8
2532 Female, age 72, left hemisphere 58.2
2693 Female, age 94, both hemispheres 57.1
1933 Female, age 85, both hemispheres 56.2
2245 Female, age 91, both hemispheres 55.1
2018 Male, age 76, both hemispheres 54.8
2692 Male, age 74, both hemispheres 53.8
2250 Female, age 67, right hemisphere 52.7
Perirhinal gyrus
nTPM: 60.6
1794 Male, age 80, right hemisphere 64.9
1847 Female, age 91, left hemisphere 61.4
1841 Female, age 85, right hemisphere 60.6
2521 Female, age 94, right hemisphere 60.1
2848 Male, age 76, right hemisphere 56.0
Subiculum
nTPM: 54.8
1901 Male, age 80, both hemispheres 57.5
1977 Female, age 85, both hemispheres 56.5
2729 Female, age 91, right hemisphere 55.7
2042 Male, age 76, both hemispheres 54.4
2619 Male, age 74, both hemispheres 54.2
2438 Female, age 94, left hemisphere 50.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.6
Samples: 197

Max nTPM: 97.7
Min nTPM: 19.6
Std nTPM: 15.2
Median nTPM: 56.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 97.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 97.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 96.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 93.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 92.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 92.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 91.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 89.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 89.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 87.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 82.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.8
FF:10153-102I9 76 years, female 30.9
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 27.1
Min nTPM: 16.1
Sample A Female 27.1
Sample B Female 22.6
Sample C Male 20.4
Sample D Male 16.1
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 26.1
Min nTPM: 19.5
Sample A Female 24.5
Sample B Female 26.1
Sample C Male 22.9
Sample D Male 19.5
Subiculum
nTPM: 20.8
Samples: 4

Max nTPM: 26.4
Min nTPM: 18.1
Sample A Female 26.4
Sample B Female 19.2
Sample C Male 19.6
Sample D Male 18.1
Ventral hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 27.8
Min nTPM: 16.5
Sample A Female 22.5
Sample B Female 16.5
Sample C Male 27.8
Sample D Male 21.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 153.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 153.3
Samples: 4

Max nTPM: 175.1
Min nTPM: 138.7
Sample A Male 154.1
Sample B Male 175.1
Sample C Female 138.7
Sample D Female 145.3
Hippocampal formation
nTPM: 145.0
Samples: 4

Max nTPM: 147.1
Min nTPM: 140.9
Sample A Male 146.4
Sample B Male 145.4
Sample C Female 147.1
Sample D Female 140.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.9
70919364 Antisense, RP_050713_01_B09, Mouse strain C57BL/6J (56 days, male) 23.3
68196922 Antisense, RP_041116_01_E10, Mouse strain C57BL/6J (56 days, male) 20.5

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