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RPS15
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  • RPS15
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Endocrine cells: High
Enterocytes: High
Enterocytes - Gradient: Descending
Enterocytes - Microvilli: Not detected
Goblet cells: High
Paneth cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1250.1 nTPM
HPA:570.7 nTPM
GTEx:1250.1 nTPM
FANTOM5:87.1 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA054510Antibody HPA057793
Endocrine cells -High
Enterocytes -High
Enterocytes - Gradient -Descending
Enterocytes - Microvilli -Not detected
Glandular cells Medium-
Goblet cells -High
Paneth cells -High




SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 570.7
overview
Male, age 65
Small intestine sample 232
nTPM: 730.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 567.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 495.6
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 488.6

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1250.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1250.1
Samples: 187

Max nTPM: 2379.4
Min nTPM: 667.4
Std nTPM: 343.9
Median nTPM: 1217.2
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 2379.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 2308.1
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 2241.7
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2226.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2157.3
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 2094.0
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1993.5
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1985.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1973.3
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1956.9
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1953.3
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1937.2
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1854.5
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1824.0
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1814.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1743.1
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1741.6
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1737.3
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1703.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1684.7
GTEX-183FY-1626-SM-793D8 20-29 years, male 1671.7
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1653.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1636.4
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1636.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1635.9
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1629.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1624.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1621.3
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1611.2
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1601.6
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1593.0
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1580.7
GTEX-1192X-2526-SM-59868 50-59 years, male 1567.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1560.8
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1521.3
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1516.8
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1512.1
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1509.1
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1498.8
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1481.9
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1478.9
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1467.4
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1462.9
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1448.0
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1445.6
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1443.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1432.3
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1432.2
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1419.6
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1410.2
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1404.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1371.6
GTEX-1C475-1426-SM-793CH 40-49 years, female 1366.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1363.6
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1357.1
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1355.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1345.9
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1336.8
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1331.4
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1325.4
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1324.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1322.4
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1321.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1317.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1314.5
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1311.8
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1307.8
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 1306.9
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1306.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1305.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1304.3
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1303.4
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1303.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1296.4
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1292.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 1288.0
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1280.8
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1280.8
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1277.5
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1276.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1272.7
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1267.8
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1258.9
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1248.1
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1245.7
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1244.1
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1241.3
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1232.9
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1232.3
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1229.1
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1226.8
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1226.1
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1218.8
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1217.2
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1213.8
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1204.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1193.9
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1187.8
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1180.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1178.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1175.9
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1174.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1162.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1159.8
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1152.8
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1147.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1124.1
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1113.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1108.9
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1107.9
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1100.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1100.5
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1098.6
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1097.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1090.0
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1089.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1087.9
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1083.3
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1081.7
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1080.6
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1080.1
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1073.5
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1070.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1067.9
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1067.6
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1056.6
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1055.9
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1054.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1041.8
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1040.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1038.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1032.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1032.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1030.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1029.7
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1027.6
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1012.0
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1010.4
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1004.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 994.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 984.9
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 982.6
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 980.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 979.9
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 976.4
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 976.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 967.0
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 962.6
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 952.5
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 951.3
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 943.8
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 937.0
GTEX-111YS-1426-SM-5GID8 60-69 years, male 933.4
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 926.9
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 922.8
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 918.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 916.1
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 909.2
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 908.2
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 895.8
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 885.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 872.7
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 868.6
GTEX-YFCO-1326-SM-664NV 40-49 years, male 868.5
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 865.7
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 862.9
GTEX-144GM-1026-SM-79OKU 20-29 years, male 854.9
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 854.5
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 853.6
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 852.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 846.6
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 841.2
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 839.6
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 839.5
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 830.6
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 829.3
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 826.3
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 814.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 805.8
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 796.4
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 788.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 778.3
GTEX-14PN3-2026-SM-68729 60-69 years, female 775.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 765.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 736.0
GTEX-ZTSS-0926-SM-59865 40-49 years, male 733.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 667.4
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 87.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 87.1
FF:10024-101D6 15,40,85 years, mixed 87.1

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