AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:78.2 nTPM
HPA:78.2 nTPM
GTEx:66.2 nTPM
FANTOM5:56.4 Scaled Tags Per Million
Pig:42.7 nTPM
Mouse:158.7 nTPM
Allen mouse:13.9 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 78.2
Sample id Sample description nTPM
Amygdala
nTPM: 78.2
2814 Male, age 76, right hemisphere 94.4
2514 Male, age 75, right hemisphere 83.6
1987 Female, age 91, left hemisphere 72.7
2695 Female, age 67, right hemisphere 72.2
2517 Female, age 94, left hemisphere 68.3
Basal amygdala
nTPM: 65.5
2609 Male, age 75, right hemisphere 73.5
1955 Male, age 76, both hemispheres 71.2
2110 Male, age 80, left hemisphere 69.0
2243 Female, age 91, right hemisphere 63.1
2685 Female, age 94, left hemisphere 61.3
2827 Female, age 67, right hemisphere 54.6
Central amygdala
nTPM: 74.1
1905 Male, age 76, both hemispheres 97.4
2826 Female, age 94, left hemisphere 81.2
2515 Male, age 75, right hemisphere 70.9
2239 Male, age 80, left hemisphere 67.5
2701 Female, age 91, right hemisphere 53.4
Corticomedial amygdala
nTPM: 59.3
2428 Male, age 75, right hemisphere 67.1
2829 Male, age 80, left hemisphere 66.1
2240 Male, age 76, both hemispheres 60.2
2429 Female, age 94, left hemisphere 59.5
2242 Female, age 91, right hemisphere 55.3
2535 Female, age 67, right hemisphere 47.7
Lateral amygdala
nTPM: 71.0
2516 Male, age 75, right hemisphere 81.6
1883 Male, age 76, both hemispheres 81.1
2534 Female, age 94, left hemisphere 80.7
2830 Female, age 67, right hemisphere 62.1
2256 Male, age 80, left hemisphere 60.5
2255 Female, age 91, right hemisphere 59.9
Stria terminalis, bed nucleus
nTPM: 69.1
1974 Female, age 91, both hemispheres 80.1
2486 Female, age 94, both hemispheres 64.3
2201 Male, age 74, unknown 62.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 66.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 66.2
Samples: 152

Max nTPM: 194.1
Min nTPM: 19.8
Std nTPM: 24.6
Median nTPM: 63.0
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 194.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 172.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 148.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 148.1
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 144.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 117.4
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 103.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 99.2
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 97.2
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 95.0
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 94.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 56.4
FF:10151-102I7 76 years, female 56.4

AMYGDALA - Pig RNA-seqi
Average nTPM 42.7
Pig sample Sample description nTPM
Amygdala
nTPM: 42.8
Samples: 4

Max nTPM: 61.0
Min nTPM: 35.5
Sample A Female 61.0
Sample B Female 38.8
Sample C Male 35.5
Sample D Male 35.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 158.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 158.7
Samples: 4

Max nTPM: 180.9
Min nTPM: 137.4
Sample A Male 160.3
Sample B Male 156.3
Sample C Female 180.9
Sample D Female 137.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 13.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 13.9
70526029 Antisense, RP_050317_04_H04, Mouse strain C57BL/6J (56 days, male) 13.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.