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SPTBN1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:130.9 nTPM
FANTOM5:662.1 Scaled Tags Per Million
Pig:223.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA012685Antibody HPA013149
Glial cells LowNot detected
Neuronal cells MediumLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 130.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 130.9
Samples: 246

Max nTPM: 291.6
Min nTPM: 43.2
Std nTPM: 44.4
Median nTPM: 124.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 291.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 287.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 281.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 274.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 274.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 260.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 257.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 243.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 239.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 236.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 219.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 218.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 215.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 211.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 209.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 206.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 204.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 203.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 195.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 194.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 193.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 190.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 187.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 186.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 184.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 183.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 180.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 180.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 179.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 178.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 178.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 174.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 173.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 170.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 169.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 168.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 167.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 167.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 167.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 166.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 165.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 165.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 163.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 162.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 161.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 161.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 161.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 159.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 159.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 158.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 156.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 155.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 155.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 155.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 155.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 155.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 154.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 154.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 153.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 153.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 153.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 152.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 150.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 149.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 149.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 148.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 148.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 147.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 146.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 146.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 146.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 145.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 145.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 145.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 145.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 145.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 144.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 144.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 144.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 143.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 143.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 142.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 140.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 140.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 140.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 139.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 139.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 139.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 139.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 139.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 139.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 139.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 138.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 137.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 137.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 136.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 135.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 135.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 135.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 135.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 134.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 133.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 133.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 132.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 132.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 131.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 131.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 130.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 130.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 130.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 129.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 128.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 128.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 128.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 127.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 126.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 126.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 126.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 126.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 126.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 125.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 124.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 124.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 123.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 122.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 122.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 121.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 121.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 121.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 120.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 120.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 120.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 120.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 120.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 119.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 119.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 119.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 118.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 118.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 118.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 118.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 118.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 116.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 116.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 115.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 115.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 114.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 114.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 114.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 113.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 113.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 113.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 113.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 113.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 112.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 111.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 110.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 110.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 110.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 110.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 109.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 109.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 109.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 109.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 109.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 109.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 108.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 108.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 107.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 107.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 106.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 106.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 105.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 104.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 104.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 103.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 103.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 103.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 102.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 102.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 102.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 102.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 101.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 101.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 101.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 101.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 100.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 100.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 99.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 99.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 99.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 99.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 98.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 98.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 98.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 98.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 97.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 95.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 95.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 93.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 93.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 92.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 92.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 91.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 89.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 89.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 88.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 87.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 87.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 86.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 86.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 85.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 84.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 84.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 84.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 83.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 83.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 82.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 81.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 81.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 79.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 78.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 77.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 77.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 77.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 77.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 77.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 76.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 76.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 75.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 75.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 74.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 72.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 72.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 70.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 68.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 68.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 65.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 54.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 48.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 45.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 43.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 662.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 662.1
FF:10164-103B2 76 years, female 662.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 223.1
Pig sample Sample description nTPM
Caudate
nTPM: 223.1
Samples: 4

Max nTPM: 263.8
Min nTPM: 192.2
Sample A Female 192.2
Sample B Female 217.4
Sample C Male 263.8
Sample D Male 218.8

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