HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.8 nTPM
HPA:15.8 nTPM
GTEx:19.3 nTPM
FANTOM5:37.0 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:31.8 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA071815
Glial cells High
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.2
2529 Female, age 94, left hemisphere 16.2
1898 Male, age 80, left hemisphere 15.9
2621 Female, age 67, right hemisphere 15.9
2148 Female, age 91, left hemisphere 14.7
1855 Male, age 76, left hemisphere 14.5
1911 Female, age 85, right hemisphere 14.3
Dentate gyrus
nTPM: 15.1
2530 Female, age 94, left hemisphere 16.0
2246 Female, age 85, both hemispheres 15.6
1927 Female, age 91, both hemispheres 14.9
2528 Male, age 74, both hemispheres 14.9
2531 Female, age 67, both hemispheres 14.7
2010 Male, age 76, both hemispheres 14.6
Entorhinal gyrus
nTPM: 15.8
1938 Female, age 85, left hemisphere 16.5
2764 Male, age 80, right hemisphere 16.4
2613 Female, age 94, left hemisphere 16.1
1787 Male, age 76, left hemisphere 15.6
2686 Male, age 75, right hemisphere 15.4
2117 Female, age 91, right hemisphere 14.6
Hippocampus, CA1
nTPM: 14.6
2749 Male, age 80, left hemisphere 15.0
1873 Female, age 85, both hemispheres 14.8
2527 Male, age 74, both hemispheres 14.6
2045 Male, age 76, both hemispheres 14.4
2082 Female, age 91, right hemisphere 14.4
Hippocampus, CA2
nTPM: 14.9
1963 Male, age 80, left hemisphere 15.9
1892 Male, age 76, both hemispheres 15.2
1940 Female, age 85, left hemisphere 14.8
2437 Female, age 94, left hemisphere 14.7
2113 Female, age 91, right hemisphere 14.6
2249 Male, age 74, both hemispheres 14.4
Hippocampus, CA3
nTPM: 14.7
1891 Female, age 85, both hemispheres 15.8
1867 Male, age 76, both hemispheres 15.0
2861 Female, age 67, both hemispheres 14.9
2137 Male, age 80, left hemisphere 14.5
2436 Male, age 74, both hemispheres 14.1
2620 Female, age 94, left hemisphere 14.0
Parahippocampal cortex
nTPM: 15.5
2245 Female, age 91, both hemispheres 17.2
2250 Female, age 67, right hemisphere 16.1
1933 Female, age 85, both hemispheres 15.9
2532 Female, age 72, left hemisphere 15.6
2693 Female, age 94, both hemispheres 15.4
1990 Female, age 91, right hemisphere 15.3
2018 Male, age 76, both hemispheres 15.1
2692 Male, age 74, both hemispheres 15.1
2622 Female, age 67, right hemisphere 14.7
1850 Male, age 80, both hemispheres 14.5
Perirhinal gyrus
nTPM: 15.5
2848 Male, age 76, right hemisphere 16.0
1847 Female, age 91, left hemisphere 15.7
1794 Male, age 80, right hemisphere 15.5
1841 Female, age 85, right hemisphere 15.5
2521 Female, age 94, right hemisphere 15.2
Subiculum
nTPM: 15.3
2438 Female, age 94, left hemisphere 17.0
1901 Male, age 80, both hemispheres 15.4
1977 Female, age 85, both hemispheres 15.3
2619 Male, age 74, both hemispheres 15.2
2042 Male, age 76, both hemispheres 14.9
2729 Female, age 91, right hemisphere 14.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 81.1
Min nTPM: 7.9
Std nTPM: 8.7
Median nTPM: 17.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 81.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 64.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 58.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 39.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 38.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 34.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 33.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 32.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 32.6
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 31.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.0
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 30.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.1
Sample A Female 11.6
Sample B Female 9.1
Sample C Male 10.0
Sample D Male 9.2
Entorhinal cortex
nTPM: 10.3
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.2
Sample A Female 10.0
Sample B Female 11.2
Sample C Male 11.9
Sample D Male 8.2
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 15.3
Min nTPM: 9.0
Sample A Female 15.3
Sample B Female 10.4
Sample C Male 9.0
Sample D Male 11.4
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.8
Sample A Female 10.7
Sample B Female 8.8
Sample C Male 10.9
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 33.5
Min nTPM: 22.8
Sample A Male 28.5
Sample B Male 33.5
Sample C Female 28.0
Sample D Female 22.8
Hippocampal formation
nTPM: 31.8
Samples: 4

Max nTPM: 33.9
Min nTPM: 30.4
Sample A Male 33.9
Sample B Male 31.4
Sample C Female 31.5
Sample D Female 30.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
75651230 Antisense, RP_060518_01_D08, Mouse strain C57BL/6J (56 days, male) 1.7
71664132 Antisense, RP_050927_04_G03, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.