HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.1 nTPM
HPA:11.1 nTPM
GTEx:20.8 nTPM
FANTOM5:42.9 Scaled Tags Per Million
Pig:41.8 nTPM
Mouse:14.3 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000931Antibody HPA000982Antibody CAB004049
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.1
Sample id Sample description nTPM
Hippocampus
nTPM: 6.3
1898 Male, age 80, left hemisphere 10.0
1855 Male, age 76, left hemisphere 9.5
2621 Female, age 67, right hemisphere 5.9
2148 Female, age 91, left hemisphere 5.1
2529 Female, age 94, left hemisphere 4.6
1911 Female, age 85, right hemisphere 2.8
Dentate gyrus
nTPM: 5.9
2010 Male, age 76, both hemispheres 9.5
1927 Female, age 91, both hemispheres 9.4
2528 Male, age 74, both hemispheres 4.7
2246 Female, age 85, both hemispheres 4.2
2530 Female, age 94, left hemisphere 4.1
2531 Female, age 67, both hemispheres 3.8
Entorhinal gyrus
nTPM: 7.7
1787 Male, age 76, left hemisphere 11.3
2764 Male, age 80, right hemisphere 7.6
2117 Female, age 91, right hemisphere 7.4
1938 Female, age 85, left hemisphere 7.2
2613 Female, age 94, left hemisphere 6.5
2686 Male, age 75, right hemisphere 6.2
Hippocampus, CA1
nTPM: 7.8
2045 Male, age 76, both hemispheres 13.8
2749 Male, age 80, left hemisphere 8.3
1873 Female, age 85, both hemispheres 6.2
2527 Male, age 74, both hemispheres 5.5
2082 Female, age 91, right hemisphere 5.3
Hippocampus, CA2
nTPM: 7.4
1892 Male, age 76, both hemispheres 15.0
2249 Male, age 74, both hemispheres 7.4
1963 Male, age 80, left hemisphere 6.7
2113 Female, age 91, right hemisphere 6.3
1940 Female, age 85, left hemisphere 4.8
2437 Female, age 94, left hemisphere 4.2
Hippocampus, CA3
nTPM: 6.4
1867 Male, age 76, both hemispheres 13.7
2137 Male, age 80, left hemisphere 7.6
2620 Female, age 94, left hemisphere 5.5
2436 Male, age 74, both hemispheres 4.1
1891 Female, age 85, both hemispheres 3.8
2861 Female, age 67, both hemispheres 3.7
Parahippocampal cortex
nTPM: 6.7
1850 Male, age 80, both hemispheres 11.4
1990 Female, age 91, right hemisphere 8.7
2018 Male, age 76, both hemispheres 8.0
2250 Female, age 67, right hemisphere 7.8
2245 Female, age 91, both hemispheres 6.9
2693 Female, age 94, both hemispheres 6.6
1933 Female, age 85, both hemispheres 6.0
2532 Female, age 72, left hemisphere 4.5
2622 Female, age 67, right hemisphere 3.6
2692 Male, age 74, both hemispheres 3.3
Perirhinal gyrus
nTPM: 11.1
1847 Female, age 91, left hemisphere 14.0
2848 Male, age 76, right hemisphere 13.6
1794 Male, age 80, right hemisphere 12.4
2521 Female, age 94, right hemisphere 8.1
1841 Female, age 85, right hemisphere 7.4
Subiculum
nTPM: 5.5
2042 Male, age 76, both hemispheres 7.2
1977 Female, age 85, both hemispheres 7.1
2729 Female, age 91, right hemisphere 6.0
1901 Male, age 80, both hemispheres 5.2
2619 Male, age 74, both hemispheres 4.8
2438 Female, age 94, left hemisphere 2.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 184.2
Min nTPM: 7.3
Std nTPM: 14.2
Median nTPM: 18.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 184.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 81.1
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 78.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 52.2
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 42.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 38.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 33.3
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 33.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 31.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 29.6
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 29.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.9
FF:10169-103B7 60 years, female 56.5
FF:10153-102I9 76 years, female 29.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 46.7
Min nTPM: 36.0
Sample A Female 46.7
Sample B Female 36.0
Sample C Male 36.7
Sample D Male 37.3
Entorhinal cortex
nTPM: 38.2
Samples: 4

Max nTPM: 42.7
Min nTPM: 34.9
Sample A Female 42.7
Sample B Female 38.7
Sample C Male 36.6
Sample D Male 34.9
Subiculum
nTPM: 41.1
Samples: 4

Max nTPM: 54.0
Min nTPM: 34.2
Sample A Female 54.0
Sample B Female 34.2
Sample C Male 35.5
Sample D Male 40.5
Ventral hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 48.6
Min nTPM: 31.3
Sample A Female 48.6
Sample B Female 31.3
Sample C Male 45.5
Sample D Male 41.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.0
Sample A Male 14.1
Sample B Male 12.9
Sample C Female 15.0
Sample D Female 12.0
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 13.2
Sample A Male 13.3
Sample B Male 13.2
Sample C Female 13.9
Sample D Female 16.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
2635 Antisense, RP_040507_01_E06, Mouse strain C57BL/6J (56 days, male) 2.8
2636 Antisense, RP_040507_01_E06, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas project is funded
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