COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:85.5 nTPM
HPA:85.5 nTPM
GTEx:71.9 nTPM
FANTOM5:54.4 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 85.5
overview
Male, age 54 		Colon sample 67
nTPM: 209.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 47
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 164.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 58.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 56.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 25.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 41
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 37.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 37.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 189.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 65.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 88
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 90.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 71.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 31.2
Samples: 373

Max nTPM: 180.3
Min nTPM: 7.0
Std nTPM: 22.0
Median nTPM: 24.9
GTEX-WXYG-1726-SM-4ONCU 50-59 years, female 180.3
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 145.8
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 138.5
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 130.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 110.7
GTEX-1JMPZ-2626-SM-ARU8Z 30-39 years, male 107.3
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 105.7
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 95.4
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 95.0
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 93.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 90.1
Show allShow less
Colon - Transverse
Average nTPM: 71.9
Samples: 406

Max nTPM: 310.3
Min nTPM: 7.2
Std nTPM: 52.8
Median nTPM: 59.7
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 310.3
GTEX-WHSB-0926-SM-4M1XJ 50-59 years, male 301.0
GTEX-OHPN-2026-SM-E9TIA 60-69 years, female 298.7
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 295.2
GTEX-14PK6-1726-SM-6871J 70-79 years, female 287.6
GTEX-1HFI7-1726-SM-A9G22 50-59 years, female 259.1
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 237.1
GTEX-QCQG-1626-SM-48U26 50-59 years, female 228.6
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 219.4
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 215.8
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 202.8
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 54.4
FF:10014-101C5 62,83,84 years, mixed 54.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.