HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.7 nTPM
HPA:49.7 nTPM
GTEx:38.9 nTPM
FANTOM5:72.0 Scaled Tags Per Million
Pig:36.2 nTPM
Mouse:46.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025815
Glial cells Low
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.7
Sample id Sample description nTPM
Hippocampus
nTPM: 48.0
1898 Male, age 80, left hemisphere 49.6
2148 Female, age 91, left hemisphere 48.7
1911 Female, age 85, right hemisphere 48.6
2529 Female, age 94, left hemisphere 47.5
2621 Female, age 67, right hemisphere 47.4
1855 Male, age 76, left hemisphere 46.2
Dentate gyrus
nTPM: 47.4
1927 Female, age 91, both hemispheres 48.9
2528 Male, age 74, both hemispheres 48.0
2531 Female, age 67, both hemispheres 47.9
2246 Female, age 85, both hemispheres 47.5
2010 Male, age 76, both hemispheres 46.2
2530 Female, age 94, left hemisphere 46.2
Entorhinal gyrus
nTPM: 48.6
1938 Female, age 85, left hemisphere 50.0
2117 Female, age 91, right hemisphere 49.7
2686 Male, age 75, right hemisphere 49.7
2764 Male, age 80, right hemisphere 47.8
1787 Male, age 76, left hemisphere 47.1
2613 Female, age 94, left hemisphere 47.1
Hippocampus, CA1
nTPM: 48.4
2749 Male, age 80, left hemisphere 50.4
1873 Female, age 85, both hemispheres 50.3
2527 Male, age 74, both hemispheres 48.5
2082 Female, age 91, right hemisphere 46.7
2045 Male, age 76, both hemispheres 46.4
Hippocampus, CA2
nTPM: 48.2
1963 Male, age 80, left hemisphere 51.1
1892 Male, age 76, both hemispheres 49.0
1940 Female, age 85, left hemisphere 47.7
2249 Male, age 74, both hemispheres 47.7
2113 Female, age 91, right hemisphere 47.4
2437 Female, age 94, left hemisphere 46.1
Hippocampus, CA3
nTPM: 48.1
1891 Female, age 85, both hemispheres 51.1
2137 Male, age 80, left hemisphere 49.6
2436 Male, age 74, both hemispheres 48.5
1867 Male, age 76, both hemispheres 47.7
2861 Female, age 67, both hemispheres 46.3
2620 Female, age 94, left hemisphere 45.6
Parahippocampal cortex
nTPM: 48.7
1850 Male, age 80, both hemispheres 51.2
2693 Female, age 94, both hemispheres 50.3
1933 Female, age 85, both hemispheres 50.2
2532 Female, age 72, left hemisphere 49.0
2692 Male, age 74, both hemispheres 48.9
1990 Female, age 91, right hemisphere 48.3
2250 Female, age 67, right hemisphere 48.0
2245 Female, age 91, both hemispheres 47.5
2622 Female, age 67, right hemisphere 47.3
2018 Male, age 76, both hemispheres 46.4
Perirhinal gyrus
nTPM: 49.7
1841 Female, age 85, right hemisphere 51.7
2848 Male, age 76, right hemisphere 50.9
1794 Male, age 80, right hemisphere 49.3
1847 Female, age 91, left hemisphere 48.2
2521 Female, age 94, right hemisphere 48.2
Subiculum
nTPM: 48.6
1901 Male, age 80, both hemispheres 49.6
1977 Female, age 85, both hemispheres 49.5
2729 Female, age 91, right hemisphere 49.2
2438 Female, age 94, left hemisphere 49.1
2619 Male, age 74, both hemispheres 47.6
2042 Male, age 76, both hemispheres 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.9
Samples: 197

Max nTPM: 66.8
Min nTPM: 21.2
Std nTPM: 7.4
Median nTPM: 37.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 66.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 61.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 58.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 57.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 56.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 54.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 54.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 54.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 54.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 54.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 53.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.0
FF:10153-102I9 76 years, female 88.5
FF:10169-103B7 60 years, female 55.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 36.9
Min nTPM: 29.6
Sample A Female 33.6
Sample B Female 33.7
Sample C Male 36.9
Sample D Male 29.6
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 39.7
Min nTPM: 34.1
Sample A Female 34.8
Sample B Female 39.7
Sample C Male 36.4
Sample D Male 34.1
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 39.4
Min nTPM: 31.9
Sample A Female 39.4
Sample B Female 31.9
Sample C Male 33.3
Sample D Male 33.2
Ventral hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 34.9
Min nTPM: 27.5
Sample A Female 34.9
Sample B Female 30.8
Sample C Male 27.5
Sample D Male 32.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 54.7
Min nTPM: 41.6
Sample A Male 44.4
Sample B Male 41.6
Sample C Female 44.1
Sample D Female 54.7
Hippocampal formation
nTPM: 43.8
Samples: 4

Max nTPM: 53.3
Min nTPM: 37.0
Sample A Male 37.4
Sample B Male 47.4
Sample C Female 53.3
Sample D Female 37.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
74821956 Antisense, RP_060321_02_F03, Mouse strain C57BL/6J (56 days, male) 1.1

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