HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.4 nTPM
HPA:18.4 nTPM
GTEx:15.5 nTPM
FANTOM5:25.5 Scaled Tags Per Million
Pig:6.6 nTPM
Mouse:15.2 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018469Antibody HPA027094
Glial cells MediumNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.2
1898 Male, age 80, left hemisphere 18.0
2621 Female, age 67, right hemisphere 17.7
1911 Female, age 85, right hemisphere 17.5
2529 Female, age 94, left hemisphere 17.3
1855 Male, age 76, left hemisphere 16.7
2148 Female, age 91, left hemisphere 16.1
Dentate gyrus
nTPM: 17.5
2530 Female, age 94, left hemisphere 19.4
2246 Female, age 85, both hemispheres 17.8
2528 Male, age 74, both hemispheres 17.6
2010 Male, age 76, both hemispheres 16.9
1927 Female, age 91, both hemispheres 16.8
2531 Female, age 67, both hemispheres 16.5
Entorhinal gyrus
nTPM: 18.1
2117 Female, age 91, right hemisphere 18.6
2764 Male, age 80, right hemisphere 18.6
2613 Female, age 94, left hemisphere 18.2
2686 Male, age 75, right hemisphere 18.0
1787 Male, age 76, left hemisphere 17.5
1938 Female, age 85, left hemisphere 17.3
Hippocampus, CA1
nTPM: 17.3
2527 Male, age 74, both hemispheres 18.2
2749 Male, age 80, left hemisphere 18.1
1873 Female, age 85, both hemispheres 17.0
2082 Female, age 91, right hemisphere 17.0
2045 Male, age 76, both hemispheres 16.1
Hippocampus, CA2
nTPM: 17.9
1940 Female, age 85, left hemisphere 18.4
2249 Male, age 74, both hemispheres 18.3
1892 Male, age 76, both hemispheres 18.1
1963 Male, age 80, left hemisphere 17.9
2437 Female, age 94, left hemisphere 17.6
2113 Female, age 91, right hemisphere 16.8
Hippocampus, CA3
nTPM: 17.1
1867 Male, age 76, both hemispheres 18.2
1891 Female, age 85, both hemispheres 17.9
2137 Male, age 80, left hemisphere 17.4
2436 Male, age 74, both hemispheres 16.9
2620 Female, age 94, left hemisphere 16.0
2861 Female, age 67, both hemispheres 15.9
Parahippocampal cortex
nTPM: 17.9
2692 Male, age 74, both hemispheres 19.2
2532 Female, age 72, left hemisphere 18.9
2245 Female, age 91, both hemispheres 18.4
1850 Male, age 80, both hemispheres 18.2
2693 Female, age 94, both hemispheres 18.0
2250 Female, age 67, right hemisphere 17.5
1990 Female, age 91, right hemisphere 17.3
2018 Male, age 76, both hemispheres 17.1
1933 Female, age 85, both hemispheres 17.0
2622 Female, age 67, right hemisphere 17.0
Perirhinal gyrus
nTPM: 18.4
1794 Male, age 80, right hemisphere 19.0
1841 Female, age 85, right hemisphere 18.4
2521 Female, age 94, right hemisphere 18.3
2848 Male, age 76, right hemisphere 18.1
1847 Female, age 91, left hemisphere 17.9
Subiculum
nTPM: 17.7
2042 Male, age 76, both hemispheres 18.3
1977 Female, age 85, both hemispheres 18.2
2438 Female, age 94, left hemisphere 18.2
1901 Male, age 80, both hemispheres 17.8
2619 Male, age 74, both hemispheres 17.4
2729 Female, age 91, right hemisphere 16.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 30.7
Min nTPM: 6.2
Std nTPM: 3.5
Median nTPM: 15.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 29.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 27.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 26.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 23.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 22.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 21.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.5
FF:10153-102I9 76 years, female 29.0
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 6.5
Min nTPM: 6.0
Sample A Female 6.2
Sample B Female 6.5
Sample C Male 6.0
Sample D Male 6.3
Entorhinal cortex
nTPM: 6.6
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.7
Sample A Female 6.3
Sample B Female 7.1
Sample C Male 5.7
Sample D Male 7.3
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 6.6
Min nTPM: 6.0
Sample A Female 6.3
Sample B Female 6.5
Sample C Male 6.0
Sample D Male 6.6
Ventral hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.0
Sample A Female 5.5
Sample B Female 6.6
Sample C Male 5.0
Sample D Male 6.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.6
Sample A Male 11.8
Sample B Male 11.1
Sample C Female 15.6
Sample D Female 10.6
Hippocampal formation
nTPM: 15.2
Samples: 4

Max nTPM: 17.2
Min nTPM: 13.1
Sample A Male 17.2
Sample B Male 13.1
Sample C Female 13.9
Sample D Female 16.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69782915 Antisense, RP_050505_04_A05, Mouse strain C57BL/6J (56 days, male) 0.8

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