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HSPE1
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  • HSPE1
BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:399.9 nTPM
HPA:399.9 nTPM
FANTOM5:386.4 Scaled Tags Per Million
Allen mouse:7.0 Expression energy

PONS - HPA Brain RNA-seq
Max nTPM 399.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 385.9
2188 Female, age 91, both hemispheres 391.4
2090 Male, age 80, both hemispheres 388.0
2301 Female, age 85, both hemispheres 382.8
1984 Male, age 76, both hemispheres 381.3
Dorsal cochlear nucleus
nTPM: 388.1
2187 Female, age 91, both hemispheres 393.7
2370 Male, age 61, both hemispheres 391.4
2802 Male, age 74, right hemisphere 388.2
2378 Male, age 80, both hemispheres 386.3
2058 Male, age 76, both hemispheres 381.0
Dorsal tegmental nucleus
nTPM: 391.9
2358 Male, age 61, both hemispheres 398.8
2083 Male, age 80, both hemispheres 394.1
2326 Male, age 74, both hemispheres 388.9
1936 Male, age 76, left hemisphere 385.8
Dorsolateral tegmental area
nTPM: 390.6
2751 Female, age 85, both hemispheres 397.0
2360 Male, age 74, both hemispheres 393.6
2654 Male, age 80, both hemispheres 392.0
2337 Male, age 61, both hemispheres 386.5
2141 Male, age 76, both hemispheres 383.6
Kolliker-Fuse nucleus
nTPM: 392.8
2163 Male, age 80, both hemispheres 398.5
2793 Female, age 91, left hemisphere 393.5
2315 Male, age 76, right hemisphere 386.3
Lateral lemniscal nuclei
nTPM: 379.6
2169 Male, age 76, both hemispheres 382.1
2746 Female, age 85, left hemisphere 381.2
2320 Female, age 91, left hemisphere 379.8
2453 Male, age 74, right hemisphere 379.7
2036 Male, age 80, both hemispheres 375.4
Lateral parabrachial nucleus
nTPM: 390.4
2790 Male, age 61, both hemispheres 392.6
2139 Female, age 85, right hemisphere 390.7
2792 Male, age 76, both hemispheres 389.6
2013 Male, age 80, both hemispheres 388.8
Lateral vestibular nucleus
nTPM: 391.2
2184 Male, age 76, both hemispheres 393.4
2311 Male, age 80, both hemispheres 388.9
Locus coeruleus
nTPM: 393.6
2788 Male, age 74, unknown 401.2
2123 Female, age 91, both hemispheres 401.1
2014 Male, age 55, unknown 399.2
2720 Male, age 74, both hemispheres 392.7
2162 Male, age 80, both hemispheres 388.2
1980 Male, age 76, both hemispheres 387.2
2317 Female, age 72, unknown 385.4
Medial olivary nucleus
nTPM: 399.9
1943 Male, age 61, both hemispheres 417.8
2138 Female, age 91, both hemispheres 397.6
2851 Male, age 80, both hemispheres 393.8
1962 Male, age 76, both hemispheres 390.7
Medial parabrachial nucleus
nTPM: 392.5
2854 Male, age 80, both hemispheres 405.2
2170 Female, age 91, both hemispheres 396.4
2156 Male, age 61, both hemispheres 390.2
2786 Male, age 76, both hemispheres 385.8
2463 Female, age 85, right hemisphere 384.8
Medial periolivary nuclei
nTPM: 388.6
2791 Male, age 74, right hemisphere 406.4
2171 Female, age 85, both hemispheres 389.7
2081 Male, age 80, both hemispheres 383.0
2458 Female, age 91, both hemispheres 382.8
2063 Male, age 76, both hemispheres 381.1
Motor facial nucleus
nTPM: 386.4
2365 Male, age 74, right hemisphere 400.3
2697 Female, age 85, both hemispheres 390.4
2126 Male, age 61, both hemispheres 384.0
2795 Female, age 91, both hemispheres 382.6
2062 Male, age 76, both hemispheres 380.7
2327 Male, age 80, both hemispheres 380.1
Motor trigeminal nucleus
nTPM: 380.5
2560 Male, age 74, both hemispheres 382.1
2335 Male, age 61, both hemispheres 381.6
2079 Male, age 80, both hemispheres 381.2
2309 Male, age 76, both hemispheres 380.9
2321 Female, age 91, both hemispheres 376.8
Nuclei of the trapezoid body
nTPM: 383.1
1983 Male, age 76, both hemispheres 391.3
2166 Male, age 80, both hemispheres 384.1
2735 Female, age 85, both hemispheres 382.0
2159 Male, age 61, both hemispheres 379.1
2368 Female, age 91, both hemispheres 379.1
Paramedian reticular nucleus
nTPM: 395.2
2052 Male, age 76, both hemispheres 400.4
2050 Female, age 85, both hemispheres 398.8
2313 Male, age 61, both hemispheres 392.2
2057 Male, age 80, both hemispheres 389.3
Pontine nuclei
nTPM: 391.3
2454 Male, age 74, left hemisphere 406.0
1863 Male, age 55, unknown 404.6
2787 Female, age 85, both hemispheres 391.6
2109 Female, age 72, unknown 390.0
2319 Female, age 91, both hemispheres 389.9
2727 Male, age 61, right hemisphere 386.3
1968 Male, age 76, left hemisphere 380.9
2115 Male, age 80, left hemisphere 380.8
Pontine raphe nucleus
nTPM: 384.7
2122 Female, age 85, midline 387.5
2853 Male, age 76, midline 381.8
Posteroventral cochlear nucleus
nTPM: 390.2
2341 Male, age 80, both hemispheres 398.6
2752 Female, age 85, both hemispheres 391.9
2371 Male, age 61, both hemispheres 390.6
2135 Female, age 91, both hemispheres 390.5
2070 Male, age 76, both hemispheres 379.2
Principal sensory trigeminal nucleus
nTPM: 385.8
2367 Female, age 91, left hemisphere 389.5
2324 Male, age 76, both hemispheres 387.8
2008 Male, age 80, left hemisphere 385.1
2158 Male, age 61, both hemispheres 380.8
Reticular pontine nucleus, caudal
nTPM: 384.7
2457 Female, age 91, both hemispheres 389.6
2559 Male, age 74, both hemispheres 388.3
2092 Male, age 76, both hemispheres 381.9
2332 Male, age 80, right hemisphere 378.9
Reticular pontine nucleus, oral
nTPM: 392.0
1939 Male, age 80, both hemispheres 400.0
2361 Male, age 74, both hemispheres 395.2
2366 Female, age 91, both hemispheres 390.4
2012 Female, age 85, both hemispheres 388.5
2167 Male, age 76, both hemispheres 385.9
Reticulotegmental nucleus
nTPM: 384.6
2322 Female, age 91, both hemispheres 389.4
2325 Male, age 76, both hemispheres 385.4
2333 Male, age 80, both hemispheres 385.2
2452 Male, age 74, both hemispheres 378.4
Spinal trigeminal nucleus, oral
nTPM: 386.4
2164 Male, age 80, both hemispheres 390.9
2737 Female, age 85, both hemispheres 390.0
1978 Male, age 76, both hemispheres 378.4
Subcoeruleus area
nTPM: 389.0
1958 Male, age 80, both hemispheres 400.9
2323 Female, age 91, left hemisphere 395.9
2369 Female, age 85, left hemisphere 393.8
2451 Male, age 74, both hemispheres 380.7
2089 Male, age 76, left hemisphere 373.5
Superior olive
nTPM: 387.6
2364 Male, age 74, right hemisphere 402.4
1875 Female, age 85, both hemispheres 394.9
2561 Female, age 91, both hemispheres 381.5
2020 Male, age 76, both hemispheres 379.8
2329 Male, age 80, right hemisphere 379.3
Superior vestibular nucleus
nTPM: 399.1
2383 Male, age 74, both hemispheres 422.3
2015 Male, age 80, both hemispheres 394.6
2061 Male, age 76, both hemispheres 380.5
Ventral periolivary nuclei
nTPM: 386.2
2165 Male, age 80, both hemispheres 389.2
2023 Male, age 76, both hemispheres 388.1
2130 Female, age 85, both hemispheres 386.7
2794 Female, age 91, left hemisphere 380.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 389.3
2840 Female, age 85, both hemispheres 402.2
2359 Male, age 61, both hemispheres 401.9
1959 Male, age 76, both hemispheres 384.1
2161 Male, age 80, both hemispheres 383.8
2449 Male, age 74, both hemispheres 382.1
2456 Female, age 91, both hemispheres 381.9

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 386.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 386.4
FF:10182-103D2 60 years, female 408.9
FF:10165-103B3 76 years, female 364.0
Pons
Scaled Tags Per Million: 150.1
FF:10033-101E6 18-54 years, mixed 150.1

PONS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Pons
Expression energy: 7.0
68499485 Antisense, RP_050118_01_F05, Mouse strain C57BL/6J (56 days, male) 7.0

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