HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:56.2 nTPM
HPA:56.2 nTPM
GTEx:118.3 nTPM
FANTOM5:84.0 Scaled Tags Per Million
Pig:111.4 nTPM
Mouse:328.8 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.2
Sample id Sample description nTPM
Hippocampus
nTPM: 53.0
1898 Male, age 80, left hemisphere 55.5
1855 Male, age 76, left hemisphere 54.2
1911 Female, age 85, right hemisphere 53.0
2621 Female, age 67, right hemisphere 52.6
2529 Female, age 94, left hemisphere 51.4
2148 Female, age 91, left hemisphere 51.0
Dentate gyrus
nTPM: 53.8
1927 Female, age 91, both hemispheres 57.2
2010 Male, age 76, both hemispheres 54.4
2530 Female, age 94, left hemisphere 54.2
2246 Female, age 85, both hemispheres 53.0
2531 Female, age 67, both hemispheres 52.4
2528 Male, age 74, both hemispheres 51.7
Entorhinal gyrus
nTPM: 53.3
1787 Male, age 76, left hemisphere 55.4
1938 Female, age 85, left hemisphere 54.2
2764 Male, age 80, right hemisphere 53.6
2613 Female, age 94, left hemisphere 53.0
2686 Male, age 75, right hemisphere 52.4
2117 Female, age 91, right hemisphere 51.3
Hippocampus, CA1
nTPM: 55.4
2749 Male, age 80, left hemisphere 64.1
2045 Male, age 76, both hemispheres 54.3
2527 Male, age 74, both hemispheres 53.2
1873 Female, age 85, both hemispheres 52.7
2082 Female, age 91, right hemisphere 52.5
Hippocampus, CA2
nTPM: 53.1
1892 Male, age 76, both hemispheres 56.3
1963 Male, age 80, left hemisphere 54.2
2249 Male, age 74, both hemispheres 52.8
2437 Female, age 94, left hemisphere 52.1
1940 Female, age 85, left hemisphere 51.7
2113 Female, age 91, right hemisphere 51.7
Hippocampus, CA3
nTPM: 55.0
2137 Male, age 80, left hemisphere 63.0
1867 Male, age 76, both hemispheres 56.1
2436 Male, age 74, both hemispheres 54.6
1891 Female, age 85, both hemispheres 53.1
2620 Female, age 94, left hemisphere 52.1
2861 Female, age 67, both hemispheres 51.3
Parahippocampal cortex
nTPM: 53.3
1850 Male, age 80, both hemispheres 57.7
1990 Female, age 91, right hemisphere 53.8
2692 Male, age 74, both hemispheres 53.7
1933 Female, age 85, both hemispheres 53.4
2532 Female, age 72, left hemisphere 53.1
2693 Female, age 94, both hemispheres 53.1
2245 Female, age 91, both hemispheres 52.8
2018 Male, age 76, both hemispheres 52.6
2250 Female, age 67, right hemisphere 51.8
2622 Female, age 67, right hemisphere 51.4
Perirhinal gyrus
nTPM: 56.2
1847 Female, age 91, left hemisphere 58.6
1794 Male, age 80, right hemisphere 57.5
1841 Female, age 85, right hemisphere 56.0
2848 Male, age 76, right hemisphere 55.2
2521 Female, age 94, right hemisphere 53.5
Subiculum
nTPM: 52.7
1901 Male, age 80, both hemispheres 55.9
1977 Female, age 85, both hemispheres 54.2
2438 Female, age 94, left hemisphere 53.3
2042 Male, age 76, both hemispheres 51.9
2729 Female, age 91, right hemisphere 50.7
2619 Male, age 74, both hemispheres 50.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.3
Samples: 197

Max nTPM: 295.8
Min nTPM: 55.5
Std nTPM: 39.6
Median nTPM: 111.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 295.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 260.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 244.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 242.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 236.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 213.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 211.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 210.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 207.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 202.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 197.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.0
FF:10169-103B7 60 years, female 110.9
FF:10153-102I9 76 years, female 57.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 111.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 111.4
Samples: 4

Max nTPM: 145.4
Min nTPM: 92.2
Sample A Female 145.4
Sample B Female 114.2
Sample C Male 93.6
Sample D Male 92.2
Entorhinal cortex
nTPM: 79.2
Samples: 4

Max nTPM: 93.0
Min nTPM: 65.0
Sample A Female 79.2
Sample B Female 93.0
Sample C Male 79.7
Sample D Male 65.0
Subiculum
nTPM: 79.6
Samples: 4

Max nTPM: 106.1
Min nTPM: 67.0
Sample A Female 106.1
Sample B Female 74.8
Sample C Male 67.0
Sample D Male 70.5
Ventral hippocampus
nTPM: 96.4
Samples: 4

Max nTPM: 115.3
Min nTPM: 71.9
Sample A Female 108.5
Sample B Female 71.9
Sample C Male 90.0
Sample D Male 115.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 328.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 311.8
Samples: 4

Max nTPM: 324.8
Min nTPM: 301.1
Sample A Male 302.4
Sample B Male 319.0
Sample C Female 324.8
Sample D Female 301.1
Hippocampal formation
nTPM: 328.8
Samples: 4

Max nTPM: 356.9
Min nTPM: 304.5
Sample A Male 356.9
Sample B Male 316.8
Sample C Female 337.1
Sample D Female 304.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
513496 Antisense, RP_040810_02_A06, Mouse strain C57BL/6J (56 days, male) 9.3
81599622 Antisense, RP_071127_04_D08, Mouse strain C57BL/6J (56 days, male) 5.1

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