HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.0 nTPM
HPA:18.0 nTPM
GTEx:14.9 nTPM
FANTOM5:29.6 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:47.4 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007409
Glial cells Low
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.6
1898 Male, age 80, left hemisphere 17.7
1855 Male, age 76, left hemisphere 14.1
2621 Female, age 67, right hemisphere 13.5
2148 Female, age 91, left hemisphere 12.4
1911 Female, age 85, right hemisphere 12.1
2529 Female, age 94, left hemisphere 11.7
Dentate gyrus
nTPM: 13.8
1927 Female, age 91, both hemispheres 16.5
2010 Male, age 76, both hemispheres 15.1
2530 Female, age 94, left hemisphere 13.2
2246 Female, age 85, both hemispheres 13.1
2528 Male, age 74, both hemispheres 12.5
2531 Female, age 67, both hemispheres 12.2
Entorhinal gyrus
nTPM: 14.5
1787 Male, age 76, left hemisphere 17.0
1938 Female, age 85, left hemisphere 16.7
2613 Female, age 94, left hemisphere 15.1
2764 Male, age 80, right hemisphere 14.9
2686 Male, age 75, right hemisphere 12.2
2117 Female, age 91, right hemisphere 11.3
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 24.2
1873 Female, age 85, both hemispheres 15.1
2527 Male, age 74, both hemispheres 13.7
2045 Male, age 76, both hemispheres 13.6
2082 Female, age 91, right hemisphere 12.6
Hippocampus, CA2
nTPM: 15.1
1892 Male, age 76, both hemispheres 19.8
1963 Male, age 80, left hemisphere 19.0
2437 Female, age 94, left hemisphere 14.3
1940 Female, age 85, left hemisphere 12.8
2249 Male, age 74, both hemispheres 12.5
2113 Female, age 91, right hemisphere 12.4
Hippocampus, CA3
nTPM: 15.1
2137 Male, age 80, left hemisphere 23.2
1867 Male, age 76, both hemispheres 16.3
1891 Female, age 85, both hemispheres 13.1
2436 Male, age 74, both hemispheres 12.6
2861 Female, age 67, both hemispheres 12.6
2620 Female, age 94, left hemisphere 12.5
Parahippocampal cortex
nTPM: 14.3
1850 Male, age 80, both hemispheres 18.6
1990 Female, age 91, right hemisphere 15.8
1933 Female, age 85, both hemispheres 15.4
2250 Female, age 67, right hemisphere 14.8
2245 Female, age 91, both hemispheres 14.4
2693 Female, age 94, both hemispheres 13.7
2018 Male, age 76, both hemispheres 13.6
2532 Female, age 72, left hemisphere 13.3
2692 Male, age 74, both hemispheres 11.6
2622 Female, age 67, right hemisphere 11.5
Perirhinal gyrus
nTPM: 18.0
1847 Female, age 91, left hemisphere 20.3
1794 Male, age 80, right hemisphere 18.6
2521 Female, age 94, right hemisphere 17.6
1841 Female, age 85, right hemisphere 17.5
2848 Male, age 76, right hemisphere 16.0
Subiculum
nTPM: 13.2
1901 Male, age 80, both hemispheres 16.4
1977 Female, age 85, both hemispheres 15.6
2438 Female, age 94, left hemisphere 13.4
2619 Male, age 74, both hemispheres 12.6
2729 Female, age 91, right hemisphere 10.7
2042 Male, age 76, both hemispheres 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 27.1
Min nTPM: 6.0
Std nTPM: 4.4
Median nTPM: 14.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 27.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 26.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 24.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 23.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 22.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 22.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 22.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 22.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.6
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 23.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 27.7
Min nTPM: 16.8
Sample A Female 27.5
Sample B Female 24.8
Sample C Male 27.7
Sample D Male 16.8
Entorhinal cortex
nTPM: 25.1
Samples: 4

Max nTPM: 27.2
Min nTPM: 21.4
Sample A Female 25.4
Sample B Female 27.2
Sample C Male 26.2
Sample D Male 21.4
Subiculum
nTPM: 24.2
Samples: 4

Max nTPM: 32.9
Min nTPM: 19.3
Sample A Female 32.9
Sample B Female 21.9
Sample C Male 22.8
Sample D Male 19.3
Ventral hippocampus
nTPM: 22.9
Samples: 4

Max nTPM: 26.5
Min nTPM: 19.5
Sample A Female 23.4
Sample B Female 19.5
Sample C Male 26.5
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.8
Samples: 4

Max nTPM: 52.2
Min nTPM: 43.0
Sample A Male 43.8
Sample B Male 43.0
Sample C Female 44.0
Sample D Female 52.2
Hippocampal formation
nTPM: 47.4
Samples: 4

Max nTPM: 54.1
Min nTPM: 42.2
Sample A Male 44.6
Sample B Male 48.5
Sample C Female 54.1
Sample D Female 42.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
68158082 Antisense, RP_041116_02_H02, Mouse strain C57BL/6J (56 days, male) 3.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.