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TMEM59
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:254.2 nTPM
GTEx:254.2 nTPM
FANTOM5:216.2 Scaled Tags Per Million
Pig:108.8 nTPM
Mouse:166.4 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 254.2
GTEx sample id Sample description nTPM
Retina
Average nTPM: 254.2
Samples: 105

Max nTPM: 396.2
Min nTPM: 172.0
Std nTPM: 38.6
Median nTPM:
491_1 89 years, female 396.2
490_1 67 years, female 386.9
413_1 59 years, female 341.3
414_1 84 years, female 337.6
495_1 57 years, female 335.3
415_1 77 years, female 328.9
89_1 63 years, male 325.5
315_1 62 years, female 316.5
162_1 79 years, female 310.2
501_1 88 years, male 308.3
466_1 57 years, female 296.5
35_1 74 years, female 296.0
375_1 74 years, female 295.5
142_1 61 years, female 293.2
384_1 83 years, male 285.9
81_1 67 years, male 285.7
149_1 88 years, male 284.0
99_1 64 years, male 283.2
139_1 64 years, female 282.3
321_1 62 years, female 282.0
389_1 86 years, female 279.8
379_1 60 years, male 279.4
137_1 83 years, male 277.8
313_1 79 years, female 277.4
347_1 72 years, male 276.4
237_1 82 years, male 274.8
396_1 62 years, male 274.8
126_1 63 years, male 274.4
324_1 76 years, male 272.6
117_1 61 years, male 270.6
6_1 73 years, female 270.2
173_1 67 years, male 268.4
307_1 66 years, female 268.4
153_1 70 years, female 267.3
518_1 75 years, female 265.8
145_1 84 years, male 264.8
322_1 76 years, male 263.9
447_1 81 years, male 262.4
119_1 70 years, female 262.3
32_1 67 years, male 261.3
43_1 64 years, female 261.1
120_1 70 years, female 260.8
386_1 76 years, male 260.1
109_1 81 years, female 258.9
217_1 76 years, male 258.5
352_1 62 years, male 257.9
17_1 71 years, male 256.8
526_1 61 years, male 256.1
42_1 85 years, male 253.7
246_1 77 years, male 253.2
319_1 81 years, male 251.5
311_1 78 years, male 250.6
18_1 88 years, male 249.9
4_1 88 years, female 249.0
405_1 91 years, male 247.8
2_1 77 years, female 247.7
265_1 87 years, male 246.2
468_1 89 years, male 245.4
115_1 83 years, male 245.2
308_1 70 years, female 242.7
355_1 70 years, female 242.7
348_1 84 years, male 241.4
314_1 67 years, male 241.1
41_1 94 years, female 240.1
189_1 76 years, male 238.3
9_1 66 years, female 237.8
317_1 60 years, male 236.8
266_1 85 years, male 235.8
499_1 55 years, female 235.3
229_1 69 years, female 234.9
218_1 71 years, female 233.1
377_1 82 years, female 232.9
172_1 72 years, female 232.5
351_1 91 years, male 232.4
243_1 75 years, male 231.2
406_1 79 years, male 225.7
506_1 65 years, male 225.2
316_1 62 years, male 224.6
350_1 84 years, female 224.6
480_1 63 years, male 224.5
404_1 82 years, female 224.3
335_1 73 years, female 224.2
354_1 81 years, female 223.9
394_1 75 years, female 223.2
264_1 73 years, female 220.2
320_1 89 years, female 219.5
376_1 75 years, female 219.0
177_1 74 years, male 218.2
251_1 78 years, male 217.7
286_1 68 years, female 217.7
288_1 66 years, female 217.2
452_1 88 years, female 214.6
318_1 68 years, male 214.3
254_1 77 years, female 213.7
503_1 68 years, male 213.2
349_1 83 years, male 210.5
353_1 82 years, female 209.3
425_1 59 years, female 205.4
356_1 87 years, female 205.2
517_1 88 years, male 203.6
295_1 61 years, female 203.0
293_1 68 years, female 200.4
291_1 76 years, male 196.6
292_1 71 years, male 195.7
163_1 78 years, male 172.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 216.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 216.2
FF:10030-101E3 24-65 years, mixed 216.2

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 108.8
Pig sample Sample description nTPM
Retina
nTPM: 108.8
Samples: 4

Max nTPM: 115.0
Min nTPM: 99.2
Sample A Female 108.9
Sample B Female 111.9
Sample C Male 115.0
Sample D Male 99.2

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 166.4
Mouse sample Sample description nTPM
Retina
nTPM: 166.4
Samples: 4

Max nTPM: 237.8
Min nTPM: 122.0
Sample A Male 167.5
Sample B Male 122.0
Sample C Female 237.8
Sample D Female 138.3

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by the Knut & Alice Wallenberg Foundation.