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TMEM59
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:148.5 nTPM
FANTOM5:153.0 Scaled Tags Per Million
Pig:89.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA075447
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 148.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 148.5
Samples: 246

Max nTPM: 308.0
Min nTPM: 71.8
Std nTPM: 28.2
Median nTPM: 142.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 308.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 270.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 233.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 225.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 206.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 205.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 205.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 204.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 199.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 197.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 195.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 195.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 194.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 192.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 192.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 190.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 188.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 188.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 188.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 187.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 187.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 187.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 185.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 184.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 181.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 180.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 180.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 179.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 179.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 178.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 177.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 177.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 176.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 175.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 175.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 175.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 175.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 174.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 173.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 172.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 172.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 172.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 172.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 171.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 170.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 170.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 170.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 170.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 170.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 170.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 169.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 167.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 167.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 167.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 167.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 166.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 166.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 166.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 166.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 166.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 166.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 165.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 164.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 164.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 164.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 164.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 164.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 164.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 162.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 162.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 162.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 162.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 162.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 161.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 161.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 161.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 160.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 159.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 159.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 159.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 158.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 158.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 158.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 158.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 158.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 157.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 157.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 157.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 154.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 154.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 154.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 153.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 153.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 153.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 152.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 152.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 152.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 152.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 151.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 151.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 150.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 150.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 150.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 150.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 149.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 149.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 149.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 148.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 147.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 147.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 146.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 146.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 146.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 146.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 146.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 146.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 146.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 143.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 143.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 143.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 142.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 142.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 142.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 142.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 142.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 141.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 141.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 141.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 141.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 141.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 140.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 140.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 140.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 140.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 139.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 139.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 139.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 139.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 139.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 139.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 139.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 139.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 139.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 138.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 138.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 137.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 137.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 137.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 136.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 136.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 136.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 136.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 135.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 135.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 135.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 135.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 134.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 134.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 134.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 134.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 134.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 134.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 134.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 134.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 133.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 133.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 133.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 132.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 132.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 132.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 132.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 132.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 132.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 132.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 131.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 131.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 131.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 131.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 131.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 130.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 130.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 130.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 130.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 130.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 130.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 129.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 129.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 129.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 129.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 129.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 128.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 128.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 128.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 127.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 127.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 127.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 127.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 127.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 127.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 126.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 126.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 126.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 125.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 125.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 125.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 125.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 125.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 124.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 124.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 124.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 124.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 123.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 122.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 122.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 121.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 121.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 121.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 121.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 121.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 119.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 119.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 119.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 118.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 117.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 117.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 116.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 116.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 114.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 114.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 111.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 111.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 109.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 109.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 107.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 107.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 107.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 106.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 106.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 99.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 98.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 97.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 91.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 78.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 71.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 153.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 153.0
FF:10164-103B2 76 years, female 153.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 89.6
Pig sample Sample description nTPM
Caudate
nTPM: 89.6
Samples: 4

Max nTPM: 96.7
Min nTPM: 77.7
Sample A Female 96.7
Sample B Female 92.7
Sample C Male 91.2
Sample D Male 77.7

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