COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:50.7 nTPM
HPA:50.7 nTPM
GTEx:44.3 nTPM
FANTOM5:92.0 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA025767Antibody HPA025826Antibody HPA025951
Endothelial cells LowLowLow
Glandular cells MediumHighMedium
Peripheral nerve/ganglion Medium-Not detected







COLON - HPA RNA-seqi
Average nTPM 50.7
overview
Male, age 54 		Colon sample 67
nTPM: 43.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 42.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 55.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 45
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 41.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 59.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 71.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 56.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 42.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 69.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 49.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 43.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 38.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 44.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 39.7
Samples: 373

Max nTPM: 111.4
Min nTPM: 21.7
Std nTPM: 7.3
Median nTPM: 39.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 111.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 63.9
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 60.8
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 60.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 60.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 59.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 59.0
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 58.6
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 58.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 55.9
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 55.7
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Colon - Transverse
Average nTPM: 44.3
Samples: 406

Max nTPM: 105.6
Min nTPM: 20.2
Std nTPM: 11.7
Median nTPM: 42.1
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 105.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 92.5
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 85.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 80.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 80.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 79.7
GTEX-WHSB-0926-SM-4M1XJ 50-59 years, male 79.7
GTEX-1C4CL-2126-SM-7IGQC 30-39 years, male 73.6
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 72.5
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 71.6
GTEX-14PK6-1726-SM-6871J 70-79 years, female 71.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 92.0
FF:10014-101C5 62,83,84 years, mixed 92.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.