COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.3 nTPM
HPA:2.6 nTPM
GTEx:10.3 nTPM
FANTOM5:12.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA022018Antibody HPA022030Antibody HPA028740
Endothelial cells MediumMediumLow
Glandular cells HighHighHigh
Peripheral nerve/ganglion MediumMediumMedium





COLON - HPA RNA-seqi
Average nTPM 2.6
overview
Male, age 54 		Colon sample 67
nTPM: 1.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 1.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 3.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 3.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 2.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 2.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 3.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 2.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 10.3
Samples: 373

Max nTPM: 32.7
Min nTPM: 3.5
Std nTPM: 2.6
Median nTPM: 10.1
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 32.7
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 19.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 18.5
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 18.1
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 17.3
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 16.3
GTEX-17GQL-1626-SM-7LG69 60-69 years, male 15.7
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 15.6
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 15.2
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 15.2
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 14.7
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Colon - Transverse
Average nTPM: 9.7
Samples: 406

Max nTPM: 30.6
Min nTPM: 3.0
Std nTPM: 2.4
Median nTPM: 9.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 30.6
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 19.8
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 18.7
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 17.6
GTEX-1C4CL-2126-SM-7IGQC 30-39 years, male 16.1
GTEX-18D9U-1926-SM-7KFTM 40-49 years, male 15.8
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 14.9
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 14.8
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 14.7
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 14.6
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 14.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 12.5
FF:10014-101C5 62,83,84 years, mixed 12.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.