HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:13.1 nTPM
FANTOM5:16.1 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:32.4 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026437Antibody HPA026448Antibody HPA027271
Glial cells LowLowMedium
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.4
1855 Male, age 76, left hemisphere 15.3
1911 Female, age 85, right hemisphere 14.3
1898 Male, age 80, left hemisphere 14.0
2148 Female, age 91, left hemisphere 13.6
2621 Female, age 67, right hemisphere 12.2
2529 Female, age 94, left hemisphere 11.0
Dentate gyrus
nTPM: 13.6
1927 Female, age 91, both hemispheres 15.2
2010 Male, age 76, both hemispheres 14.4
2530 Female, age 94, left hemisphere 14.3
2246 Female, age 85, both hemispheres 13.1
2531 Female, age 67, both hemispheres 12.3
2528 Male, age 74, both hemispheres 12.2
Entorhinal gyrus
nTPM: 12.9
2764 Male, age 80, right hemisphere 13.8
2613 Female, age 94, left hemisphere 13.5
2686 Male, age 75, right hemisphere 12.7
1787 Male, age 76, left hemisphere 12.4
1938 Female, age 85, left hemisphere 12.4
2117 Female, age 91, right hemisphere 12.3
Hippocampus, CA1
nTPM: 15.1
2749 Male, age 80, left hemisphere 19.9
1873 Female, age 85, both hemispheres 15.1
2045 Male, age 76, both hemispheres 14.0
2527 Male, age 74, both hemispheres 13.7
2082 Female, age 91, right hemisphere 12.8
Hippocampus, CA2
nTPM: 14.0
1892 Male, age 76, both hemispheres 16.5
1963 Male, age 80, left hemisphere 16.0
2437 Female, age 94, left hemisphere 13.1
1940 Female, age 85, left hemisphere 13.0
2113 Female, age 91, right hemisphere 12.8
2249 Male, age 74, both hemispheres 12.8
Hippocampus, CA3
nTPM: 14.5
2137 Male, age 80, left hemisphere 18.1
1867 Male, age 76, both hemispheres 15.4
2620 Female, age 94, left hemisphere 14.9
2436 Male, age 74, both hemispheres 13.0
2861 Female, age 67, both hemispheres 13.0
1891 Female, age 85, both hemispheres 12.6
Parahippocampal cortex
nTPM: 12.7
1933 Female, age 85, both hemispheres 14.4
1850 Male, age 80, both hemispheres 13.9
2693 Female, age 94, both hemispheres 13.9
2250 Female, age 67, right hemisphere 13.1
2018 Male, age 76, both hemispheres 12.8
2532 Female, age 72, left hemisphere 12.1
2692 Male, age 74, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.9
2245 Female, age 91, both hemispheres 11.9
2622 Female, age 67, right hemisphere 11.2
Perirhinal gyrus
nTPM: 13.0
1847 Female, age 91, left hemisphere 14.2
1794 Male, age 80, right hemisphere 13.1
2521 Female, age 94, right hemisphere 13.1
1841 Female, age 85, right hemisphere 12.5
2848 Male, age 76, right hemisphere 12.2
Subiculum
nTPM: 12.9
1901 Male, age 80, both hemispheres 14.6
2042 Male, age 76, both hemispheres 13.8
1977 Female, age 85, both hemispheres 12.8
2729 Female, age 91, right hemisphere 12.8
2619 Male, age 74, both hemispheres 11.9
2438 Female, age 94, left hemisphere 11.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.1
Samples: 197

Max nTPM: 21.9
Min nTPM: 6.5
Std nTPM: 3.1
Median nTPM: 12.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 21.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 21.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 21.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 20.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 20.4
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 20.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 20.0
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 19.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 19.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.1
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 13.6
Min nTPM: 8.3
Sample A Female 13.6
Sample B Female 12.6
Sample C Male 8.3
Sample D Male 12.7
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.8
Sample A Female 6.8
Sample B Female 7.5
Sample C Male 7.4
Sample D Male 7.2
Subiculum
nTPM: 8.3
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.5
Sample A Female 9.6
Sample B Female 7.9
Sample C Male 8.1
Sample D Male 7.5
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.9
Sample A Female 11.2
Sample B Female 8.9
Sample C Male 9.8
Sample D Male 10.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 33.5
Min nTPM: 28.7
Sample A Male 28.7
Sample B Male 30.3
Sample C Female 33.5
Sample D Female 32.5
Hippocampal formation
nTPM: 32.4
Samples: 4

Max nTPM: 34.1
Min nTPM: 30.5
Sample A Male 34.1
Sample B Male 34.0
Sample C Female 31.0
Sample D Female 30.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
413776 Antisense, RP_040809_01_C08, Mouse strain C57BL/6J (56 days, male) 12.7

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