HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:81.6 nTPM
HPA:81.6 nTPM
GTEx:63.3 nTPM
FANTOM5:74.0 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:106.7 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004126
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.6
Sample id Sample description nTPM
Hippocampus
nTPM: 81.3
1898 Male, age 80, left hemisphere 84.6
2529 Female, age 94, left hemisphere 84.6
1855 Male, age 76, left hemisphere 80.2
2148 Female, age 91, left hemisphere 80.0
1911 Female, age 85, right hemisphere 79.5
2621 Female, age 67, right hemisphere 79.0
Dentate gyrus
nTPM: 79.8
1927 Female, age 91, both hemispheres 82.4
2010 Male, age 76, both hemispheres 81.8
2530 Female, age 94, left hemisphere 81.5
2246 Female, age 85, both hemispheres 78.6
2528 Male, age 74, both hemispheres 78.5
2531 Female, age 67, both hemispheres 76.2
Entorhinal gyrus
nTPM: 79.1
1787 Male, age 76, left hemisphere 81.0
2764 Male, age 80, right hemisphere 80.3
2117 Female, age 91, right hemisphere 80.2
1938 Female, age 85, left hemisphere 79.9
2613 Female, age 94, left hemisphere 76.6
2686 Male, age 75, right hemisphere 76.6
Hippocampus, CA1
nTPM: 80.8
2527 Male, age 74, both hemispheres 83.2
2749 Male, age 80, left hemisphere 82.7
2082 Female, age 91, right hemisphere 80.3
1873 Female, age 85, both hemispheres 80.1
2045 Male, age 76, both hemispheres 77.9
Hippocampus, CA2
nTPM: 81.6
1892 Male, age 76, both hemispheres 83.3
2249 Male, age 74, both hemispheres 83.2
1963 Male, age 80, left hemisphere 82.0
2437 Female, age 94, left hemisphere 80.6
2113 Female, age 91, right hemisphere 80.3
1940 Female, age 85, left hemisphere 80.2
Hippocampus, CA3
nTPM: 79.7
1867 Male, age 76, both hemispheres 81.4
2436 Male, age 74, both hemispheres 81.3
2137 Male, age 80, left hemisphere 80.4
1891 Female, age 85, both hemispheres 80.1
2620 Female, age 94, left hemisphere 78.0
2861 Female, age 67, both hemispheres 77.0
Parahippocampal cortex
nTPM: 79.4
2250 Female, age 67, right hemisphere 82.5
1850 Male, age 80, both hemispheres 80.6
2018 Male, age 76, both hemispheres 80.6
2245 Female, age 91, both hemispheres 80.4
1990 Female, age 91, right hemisphere 80.2
1933 Female, age 85, both hemispheres 80.1
2622 Female, age 67, right hemisphere 77.8
2692 Male, age 74, both hemispheres 77.7
2532 Female, age 72, left hemisphere 77.6
2693 Female, age 94, both hemispheres 76.3
Perirhinal gyrus
nTPM: 80.7
1847 Female, age 91, left hemisphere 83.3
1794 Male, age 80, right hemisphere 82.3
1841 Female, age 85, right hemisphere 80.8
2521 Female, age 94, right hemisphere 78.8
2848 Male, age 76, right hemisphere 78.1
Subiculum
nTPM: 79.8
2619 Male, age 74, both hemispheres 80.8
1901 Male, age 80, both hemispheres 80.6
1977 Female, age 85, both hemispheres 80.5
2729 Female, age 91, right hemisphere 79.8
2438 Female, age 94, left hemisphere 78.5
2042 Male, age 76, both hemispheres 78.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.3
Samples: 197

Max nTPM: 165.5
Min nTPM: 32.4
Std nTPM: 18.4
Median nTPM: 60.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 132.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 120.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 111.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 110.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 109.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 109.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 105.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 104.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 102.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 100.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.0
FF:10169-103B7 60 years, female 94.1
FF:10153-102I9 76 years, female 53.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 18.4
Min nTPM: 10.8
Sample A Female 18.4
Sample B Female 14.1
Sample C Male 15.0
Sample D Male 10.8
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.3
Sample A Female 13.3
Sample B Female 14.9
Sample C Male 12.3
Sample D Male 10.3
Subiculum
nTPM: 12.1
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.3
Sample A Female 15.6
Sample B Female 10.9
Sample C Male 11.7
Sample D Male 10.3
Ventral hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.0
Sample A Female 12.2
Sample B Female 10.0
Sample C Male 14.7
Sample D Male 13.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.4
Samples: 4

Max nTPM: 105.1
Min nTPM: 97.9
Sample A Male 102.9
Sample B Male 97.9
Sample C Female 103.6
Sample D Female 105.1
Hippocampal formation
nTPM: 106.7
Samples: 4

Max nTPM: 117.1
Min nTPM: 100.9
Sample A Male 100.9
Sample B Male 101.6
Sample C Female 117.1
Sample D Female 107.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
70546111 Antisense, RP_050623_03_F04, Mouse strain C57BL/6J (56 days, male) 1.5

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