COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:56.2 nTPM
HPA:23.9 nTPM
GTEx:56.2 nTPM
FANTOM5:21.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA015746
Endothelial cells Low
Glandular cells High
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 23.9
overview
Male, age 54 		Colon sample 67
nTPM: 22.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 17.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 23.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 14.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 38.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 40.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 18.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 21.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 27.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 23.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 21.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 21.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 20.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 56.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 56.2
Samples: 373

Max nTPM: 216.3
Min nTPM: 20.7
Std nTPM: 21.1
Median nTPM: 52.0
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 216.3
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 169.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 168.6
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 155.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 136.8
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 133.3
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 127.0
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 118.8
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 105.7
GTEX-13X6J-2826-SM-7EPGA 50-59 years, male 100.5
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 97.9
Show allShow less
Colon - Transverse
Average nTPM: 43.0
Samples: 406

Max nTPM: 155.4
Min nTPM: 10.0
Std nTPM: 18.3
Median nTPM: 40.3
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 155.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 147.4
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 134.9
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 124.2
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 112.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 103.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 99.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 91.9
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 89.3
GTEX-17F96-2026-SM-79ON4 70-79 years, male 85.9
GTEX-QLQ7-1126-SM-CYPRB 60-69 years, male 83.5
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 21.5
FF:10014-101C5 62,83,84 years, mixed 21.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.