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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA062235
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1238.9
Min nTPM: 247.5
Std nTPM: 231.9
Median nTPM:
414_1
84 years, female
1238.9
518_1
75 years, female
1229.4
491_1
89 years, female
1224.5
149_1
88 years, male
1220.7
413_1
59 years, female
1195.8
466_1
57 years, female
1145.5
139_1
64 years, female
1136.5
246_1
77 years, male
1106.4
322_1
76 years, male
1076.0
490_1
67 years, female
1059.5
415_1
77 years, female
1035.8
126_1
63 years, male
985.7
377_1
82 years, female
979.8
217_1
76 years, male
972.5
468_1
89 years, male
968.6
389_1
86 years, female
963.6
162_1
79 years, female
948.2
43_1
64 years, female
939.1
266_1
85 years, male
925.2
153_1
70 years, female
876.7
81_1
67 years, male
857.9
316_1
62 years, male
843.4
265_1
87 years, male
815.8
251_1
78 years, male
814.6
32_1
67 years, male
793.5
35_1
74 years, female
787.7
404_1
82 years, female
785.9
320_1
89 years, female
785.8
526_1
61 years, male
750.9
115_1
83 years, male
748.2
254_1
77 years, female
736.2
425_1
59 years, female
711.2
89_1
63 years, male
706.0
503_1
68 years, male
703.2
17_1
71 years, male
699.8
229_1
69 years, female
692.4
501_1
88 years, male
692.3
18_1
88 years, male
686.3
109_1
81 years, female
682.5
495_1
57 years, female
680.0
9_1
66 years, female
676.9
394_1
75 years, female
669.7
142_1
61 years, female
666.9
375_1
74 years, female
666.9
318_1
68 years, male
666.1
405_1
91 years, male
665.4
4_1
88 years, female
656.6
315_1
62 years, female
649.8
396_1
62 years, male
644.4
499_1
55 years, female
638.1
293_1
68 years, female
622.0
480_1
63 years, male
614.6
376_1
75 years, female
612.9
2_1
77 years, female
609.7
117_1
61 years, male
606.8
313_1
79 years, female
604.5
292_1
71 years, male
602.9
288_1
66 years, female
596.1
319_1
81 years, male
595.1
189_1
76 years, male
595.0
517_1
88 years, male
593.5
324_1
76 years, male
592.0
6_1
73 years, female
591.4
145_1
84 years, male
589.5
307_1
66 years, female
587.2
137_1
83 years, male
586.6
355_1
70 years, female
575.6
237_1
82 years, male
572.7
384_1
83 years, male
565.3
386_1
76 years, male
557.1
335_1
73 years, female
551.2
406_1
79 years, male
544.9
42_1
85 years, male
544.2
352_1
62 years, male
539.9
120_1
70 years, female
533.7
264_1
73 years, female
506.5
314_1
67 years, male
505.4
243_1
75 years, male
502.6
163_1
78 years, male
501.3
172_1
72 years, female
499.5
311_1
78 years, male
498.4
291_1
76 years, male
496.3
321_1
62 years, female
489.0
119_1
70 years, female
485.8
349_1
83 years, male
479.2
356_1
87 years, female
473.2
347_1
72 years, male
457.4
348_1
84 years, male
453.5
177_1
74 years, male
440.9
99_1
64 years, male
440.7
295_1
61 years, female
432.1
447_1
81 years, male
426.1
286_1
68 years, female
424.6
379_1
60 years, male
424.2
354_1
81 years, female
417.1
41_1
94 years, female
416.1
351_1
91 years, male
396.6
350_1
84 years, female
383.1
452_1
88 years, female
354.7
173_1
67 years, male
352.0
353_1
82 years, female
347.1
218_1
71 years, female
344.0
506_1
65 years, male
333.9
317_1
60 years, male
264.2
308_1
70 years, female
247.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.