COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:45.0 nTPM
HPA:30.6 nTPM
GTEx:45.0 nTPM
FANTOM5:12.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 30.6
overview
Male, age 54 		Colon sample 67
nTPM: 41.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 40.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 33.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 20.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 41.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 29
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 28.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 26.7
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 25.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 24.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 22.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 36.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 27.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 45.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 45.0
Samples: 373

Max nTPM: 99.8
Min nTPM: 15.0
Std nTPM: 8.6
Median nTPM: 45.2
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 99.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 69.5
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 67.0
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 67.0
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 66.4
GTEX-1H1ZS-2626-SM-9QEIX 70-79 years, male 64.3
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 64.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 64.0
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 62.9
GTEX-13RTJ-1926-SM-5YYA2 60-69 years, male 60.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 60.5
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Colon - Transverse
Average nTPM: 36.0
Samples: 406

Max nTPM: 69.0
Min nTPM: 13.5
Std nTPM: 9.6
Median nTPM: 34.6
GTEX-OHPN-2026-SM-E9TIA 60-69 years, female 69.0
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 64.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 61.3
GTEX-OXRN-2026-SM-E6CHK 50-59 years, male 59.3
GTEX-1IGQW-2326-SM-CE6RV 60-69 years, male 57.3
GTEX-14BIN-3026-SM-5ZZUS 50-59 years, female 57.0
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 56.2
GTEX-1QMI2-2626-SM-E6CR4 60-69 years, male 55.6
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 55.5
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 55.1
GTEX-1AYD5-1726-SM-7RHFW 50-59 years, male 55.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 12.7
FF:10014-101C5 62,83,84 years, mixed 12.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.