HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.3 nTPM
HPA:55.3 nTPM
GTEx:48.0 nTPM
FANTOM5:23.4 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:43.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037272
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.3
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
2529 Female, age 94, left hemisphere 56.0
1898 Male, age 80, left hemisphere 55.6
2148 Female, age 91, left hemisphere 55.6
1911 Female, age 85, right hemisphere 54.8
1855 Male, age 76, left hemisphere 54.0
2621 Female, age 67, right hemisphere 53.5
Dentate gyrus
nTPM: 53.8
2530 Female, age 94, left hemisphere 56.2
2010 Male, age 76, both hemispheres 54.9
2528 Male, age 74, both hemispheres 54.8
2246 Female, age 85, both hemispheres 52.4
2531 Female, age 67, both hemispheres 52.2
1927 Female, age 91, both hemispheres 52.0
Entorhinal gyrus
nTPM: 55.3
2117 Female, age 91, right hemisphere 60.5
2686 Male, age 75, right hemisphere 56.1
1938 Female, age 85, left hemisphere 54.3
1787 Male, age 76, left hemisphere 53.7
2764 Male, age 80, right hemisphere 53.7
2613 Female, age 94, left hemisphere 53.5
Hippocampus, CA1
nTPM: 53.3
1873 Female, age 85, both hemispheres 54.7
2527 Male, age 74, both hemispheres 54.2
2082 Female, age 91, right hemisphere 54.0
2045 Male, age 76, both hemispheres 51.9
2749 Male, age 80, left hemisphere 51.7
Hippocampus, CA2
nTPM: 54.6
1963 Male, age 80, left hemisphere 55.5
2437 Female, age 94, left hemisphere 55.0
1940 Female, age 85, left hemisphere 54.9
2113 Female, age 91, right hemisphere 54.5
1892 Male, age 76, both hemispheres 53.7
2249 Male, age 74, both hemispheres 53.7
Hippocampus, CA3
nTPM: 54.2
2861 Female, age 67, both hemispheres 56.4
1891 Female, age 85, both hemispheres 55.8
1867 Male, age 76, both hemispheres 55.0
2620 Female, age 94, left hemisphere 53.3
2137 Male, age 80, left hemisphere 52.4
2436 Male, age 74, both hemispheres 52.1
Parahippocampal cortex
nTPM: 52.5
2692 Male, age 74, both hemispheres 54.5
2018 Male, age 76, both hemispheres 53.4
1990 Female, age 91, right hemisphere 53.2
2250 Female, age 67, right hemisphere 53.2
1850 Male, age 80, both hemispheres 52.6
1933 Female, age 85, both hemispheres 52.0
2622 Female, age 67, right hemisphere 51.8
2532 Female, age 72, left hemisphere 51.7
2245 Female, age 91, both hemispheres 51.5
2693 Female, age 94, both hemispheres 51.1
Perirhinal gyrus
nTPM: 51.5
1794 Male, age 80, right hemisphere 52.0
1847 Female, age 91, left hemisphere 51.9
1841 Female, age 85, right hemisphere 51.6
2848 Male, age 76, right hemisphere 51.1
2521 Female, age 94, right hemisphere 50.8
Subiculum
nTPM: 54.6
2042 Male, age 76, both hemispheres 56.8
2729 Female, age 91, right hemisphere 56.3
2619 Male, age 74, both hemispheres 55.5
1901 Male, age 80, both hemispheres 54.7
1977 Female, age 85, both hemispheres 53.7
2438 Female, age 94, left hemisphere 50.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.0
Samples: 197

Max nTPM: 73.3
Min nTPM: 27.4
Std nTPM: 8.5
Median nTPM: 48.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 73.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 72.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 68.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 67.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 64.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 64.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 62.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 62.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 61.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 61.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 61.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.4
FF:10153-102I9 76 years, female 29.0
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.1
Samples: 4

Max nTPM: 26.0
Min nTPM: 14.7
Sample A Female 26.0
Sample B Female 19.4
Sample C Male 20.4
Sample D Male 14.7
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 20.8
Min nTPM: 14.7
Sample A Female 20.8
Sample B Female 19.7
Sample C Male 20.0
Sample D Male 14.7
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.5
Sample A Female 23.5
Sample B Female 17.0
Sample C Male 16.5
Sample D Male 18.2
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 23.7
Min nTPM: 15.5
Sample A Female 22.7
Sample B Female 15.5
Sample C Male 23.7
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.4
Samples: 4

Max nTPM: 47.8
Min nTPM: 38.1
Sample A Male 47.8
Sample B Male 40.5
Sample C Female 38.1
Sample D Female 39.1
Hippocampal formation
nTPM: 43.9
Samples: 4

Max nTPM: 51.9
Min nTPM: 34.9
Sample A Male 34.9
Sample B Male 46.6
Sample C Female 51.9
Sample D Female 42.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
1991 Antisense, RP_040604_01_F08, Mouse strain C57BL/6J (56 days, male) 0.3
1990 Antisense, RP_040604_01_F08, Mouse strain C57BL/6J (56 days, male) 0.3

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