HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:231.3 nTPM
HPA:231.3 nTPM
GTEx:176.2 nTPM
FANTOM5:62.8 Scaled Tags Per Million
Pig:70.8 nTPM
Mouse:432.1 nTPM
Allen mouse:23.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 231.3
Sample id Sample description nTPM
Hippocampus
nTPM: 220.5
1898 Male, age 80, left hemisphere 245.9
1855 Male, age 76, left hemisphere 227.3
2621 Female, age 67, right hemisphere 218.8
2148 Female, age 91, left hemisphere 212.5
1911 Female, age 85, right hemisphere 209.3
2529 Female, age 94, left hemisphere 209.1
Dentate gyrus
nTPM: 226.8
2530 Female, age 94, left hemisphere 244.5
2010 Male, age 76, both hemispheres 238.1
1927 Female, age 91, both hemispheres 234.8
2528 Male, age 74, both hemispheres 220.7
2246 Female, age 85, both hemispheres 216.0
2531 Female, age 67, both hemispheres 206.9
Entorhinal gyrus
nTPM: 218.0
2764 Male, age 80, right hemisphere 231.8
2613 Female, age 94, left hemisphere 223.4
1787 Male, age 76, left hemisphere 220.2
2117 Female, age 91, right hemisphere 218.1
1938 Female, age 85, left hemisphere 217.8
2686 Male, age 75, right hemisphere 196.8
Hippocampus, CA1
nTPM: 231.3
2749 Male, age 80, left hemisphere 272.6
2045 Male, age 76, both hemispheres 227.2
1873 Female, age 85, both hemispheres 226.5
2527 Male, age 74, both hemispheres 215.8
2082 Female, age 91, right hemisphere 214.5
Hippocampus, CA2
nTPM: 229.1
1963 Male, age 80, left hemisphere 255.6
1892 Male, age 76, both hemispheres 246.6
2437 Female, age 94, left hemisphere 223.6
2249 Male, age 74, both hemispheres 223.0
1940 Female, age 85, left hemisphere 215.5
2113 Female, age 91, right hemisphere 210.1
Hippocampus, CA3
nTPM: 223.2
2137 Male, age 80, left hemisphere 237.3
1867 Male, age 76, both hemispheres 232.1
2436 Male, age 74, both hemispheres 228.3
2620 Female, age 94, left hemisphere 223.4
1891 Female, age 85, both hemispheres 213.3
2861 Female, age 67, both hemispheres 205.1
Parahippocampal cortex
nTPM: 214.1
1990 Female, age 91, right hemisphere 224.1
1850 Male, age 80, both hemispheres 222.9
2018 Male, age 76, both hemispheres 221.1
2250 Female, age 67, right hemisphere 220.2
1933 Female, age 85, both hemispheres 218.9
2532 Female, age 72, left hemisphere 214.0
2693 Female, age 94, both hemispheres 211.4
2245 Female, age 91, both hemispheres 210.1
2692 Male, age 74, both hemispheres 200.3
2622 Female, age 67, right hemisphere 198.1
Perirhinal gyrus
nTPM: 227.3
1847 Female, age 91, left hemisphere 236.8
1794 Male, age 80, right hemisphere 233.0
2521 Female, age 94, right hemisphere 228.3
1841 Female, age 85, right hemisphere 225.1
2848 Male, age 76, right hemisphere 213.3
Subiculum
nTPM: 215.5
1901 Male, age 80, both hemispheres 228.3
1977 Female, age 85, both hemispheres 224.2
2042 Male, age 76, both hemispheres 214.3
2619 Male, age 74, both hemispheres 212.8
2729 Female, age 91, right hemisphere 210.7
2438 Female, age 94, left hemisphere 202.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 176.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 176.2
Samples: 197

Max nTPM: 403.0
Min nTPM: 75.3
Std nTPM: 61.2
Median nTPM: 166.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 403.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 396.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 366.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 351.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 336.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 318.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 313.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 293.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 291.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 286.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 283.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.8
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 40.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.8
Samples: 4

Max nTPM: 101.9
Min nTPM: 49.8
Sample A Female 101.9
Sample B Female 71.4
Sample C Male 60.2
Sample D Male 49.8
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 65.9
Min nTPM: 48.8
Sample A Female 65.9
Sample B Female 58.8
Sample C Male 63.0
Sample D Male 48.8
Subiculum
nTPM: 54.3
Samples: 4

Max nTPM: 69.4
Min nTPM: 48.3
Sample A Female 69.4
Sample B Female 49.2
Sample C Male 48.3
Sample D Male 50.1
Ventral hippocampus
nTPM: 65.2
Samples: 4

Max nTPM: 78.2
Min nTPM: 39.0
Sample A Female 76.3
Sample B Female 39.0
Sample C Male 78.2
Sample D Male 67.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 432.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 432.1
Samples: 4

Max nTPM: 471.9
Min nTPM: 393.3
Sample A Male 393.3
Sample B Male 471.9
Sample C Female 450.1
Sample D Female 413.0
Hippocampal formation
nTPM: 431.2
Samples: 4

Max nTPM: 491.7
Min nTPM: 383.0
Sample A Male 491.7
Sample B Male 383.0
Sample C Female 416.6
Sample D Female 433.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.7
71608227 Antisense, RP_050927_01_C11, Mouse strain C57BL/6J (56 days, male) 26.6
293682 Antisense, RP_040604_02_H09, Mouse strain C57BL/6J (56 days, male) 20.7

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