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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:382.9 nTPM
FANTOM5:335.7 Scaled Tags Per Million
Pig:37.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA007730Antibody CAB004682
Glial cells MediumMedium
Neuronal cells Not detectedLow




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 382.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 382.9
Samples: 246

Max nTPM: 789.9
Min nTPM: 198.6
Std nTPM: 113.4
Median nTPM: 368.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 789.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 769.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 760.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 723.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 708.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 691.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 642.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 632.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 604.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 588.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 578.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 575.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 574.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 573.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 565.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 564.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 564.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 554.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 552.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 552.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 551.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 542.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 535.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 529.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 528.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 526.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 517.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 517.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 516.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 515.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 514.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 509.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 505.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 502.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 501.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 500.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 500.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 491.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 491.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 490.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 488.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 487.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 487.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 485.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 485.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 484.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 483.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 483.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 482.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 480.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 480.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 473.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 468.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 467.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 460.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 459.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 458.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 458.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 457.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 455.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 454.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 452.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 450.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 450.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 450.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 448.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 448.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 447.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 442.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 440.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 439.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 439.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 437.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 436.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 434.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 432.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 430.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 429.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 429.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 428.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 427.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 426.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 426.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 426.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 426.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 424.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 417.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 415.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 413.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 413.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 412.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 409.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 406.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 405.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 403.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 402.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 399.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 398.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 398.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 397.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 397.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 396.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 396.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 393.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 392.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 389.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 389.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 387.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 387.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 384.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 382.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 381.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 379.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 378.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 378.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 376.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 375.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 375.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 371.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 371.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 370.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 370.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 369.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 367.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 365.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 365.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 364.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 359.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 357.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 357.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 357.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 355.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 355.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 353.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 352.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 351.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 349.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 348.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 344.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 343.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 343.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 342.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 341.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 340.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 337.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 336.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 336.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 335.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 334.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 332.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 330.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 330.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 329.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 328.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 327.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 326.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 326.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 323.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 322.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 322.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 321.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 319.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 318.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 317.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 314.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 314.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 313.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 313.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 312.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 311.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 311.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 309.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 307.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 303.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 301.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 299.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 298.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 298.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 295.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 294.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 294.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 293.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 292.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 292.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 292.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 290.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 289.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 288.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 287.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 286.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 286.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 284.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 284.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 281.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 279.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 276.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 276.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 276.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 276.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 275.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 275.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 272.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 272.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 271.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 271.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 268.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 268.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 267.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 264.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 264.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 262.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 261.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 260.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 259.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 259.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 259.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 258.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 258.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 258.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 257.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 255.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 255.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 252.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 251.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 249.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 249.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 248.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 246.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 245.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 243.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 243.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 242.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 240.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 239.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 238.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 236.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 231.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 230.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 228.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 222.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 220.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 219.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 212.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 209.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 200.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 198.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 335.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 335.7
FF:10164-103B2 76 years, female 335.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 37.7
Pig sample Sample description nTPM
Caudate
nTPM: 37.7
Samples: 4

Max nTPM: 43.2
Min nTPM: 33.2
Sample A Female 33.7
Sample B Female 40.8
Sample C Male 43.2
Sample D Male 33.2

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