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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:158.0 nTPM
FANTOM5:497.7 Scaled Tags Per Million
Pig:120.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA051237Antibody CAB009849
Glial cells LowNot detected
Neuronal cells Not detectedMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 158.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 158.0
Samples: 246

Max nTPM: 480.4
Min nTPM: 41.0
Std nTPM: 68.5
Median nTPM: 144.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 480.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 420.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 396.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 336.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 333.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 330.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 319.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 310.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 305.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 303.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 299.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 283.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 281.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 280.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 275.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 266.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 266.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 259.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 259.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 258.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 257.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 253.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 252.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 251.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 249.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 248.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 247.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 246.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 242.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 241.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 240.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 238.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 236.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 236.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 229.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 229.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 228.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 228.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 227.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 226.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 223.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 223.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 223.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 223.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 220.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 219.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 219.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 218.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 215.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 214.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 214.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 211.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 209.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 202.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 201.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 199.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 197.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 196.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 194.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 193.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 193.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 192.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 189.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 188.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 188.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 185.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 185.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 184.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 182.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 181.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 180.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 179.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 178.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 178.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 176.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 175.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 174.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 173.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 172.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 172.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 171.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 171.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 170.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 169.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 169.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 168.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 166.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 166.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 166.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 166.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 165.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 165.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 164.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 162.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 161.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 161.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 161.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 160.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 159.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 158.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 155.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 155.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 154.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 154.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 154.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 154.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 153.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 153.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 153.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 153.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 153.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 152.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 152.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 150.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 150.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 149.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 148.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 147.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 147.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 146.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 145.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 144.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 144.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 144.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 143.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 143.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 143.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 142.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 142.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 142.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 139.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 139.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 138.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 138.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 136.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 136.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 136.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 136.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 135.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 135.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 135.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 134.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 133.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 133.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 133.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 132.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 131.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 128.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 127.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 127.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 127.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 126.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 125.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 125.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 124.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 122.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 121.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 121.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 121.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 120.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 120.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 120.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 119.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 119.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 118.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 118.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 117.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 117.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 117.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 117.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 116.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 115.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 115.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 111.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 111.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 110.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 110.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 109.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 108.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 107.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 106.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 106.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 105.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 105.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 105.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 105.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 105.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 105.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 104.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 104.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 104.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 104.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 103.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 103.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 103.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 103.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 102.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 101.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 98.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 98.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 97.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 97.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 97.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 96.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 95.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 94.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 94.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 93.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 92.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 92.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 92.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 92.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 92.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 92.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 89.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 88.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 87.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 87.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 86.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 86.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 86.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 85.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 85.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 84.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 83.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 82.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 81.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 80.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 80.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 79.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 76.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 75.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 74.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 74.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 73.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 68.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 58.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 48.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 46.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 41.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 41.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 497.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 497.7
FF:10164-103B2 76 years, female 497.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 120.3
Pig sample Sample description nTPM
Caudate
nTPM: 120.3
Samples: 4

Max nTPM: 130.1
Min nTPM: 104.6
Sample A Female 128.1
Sample B Female 118.3
Sample C Male 130.1
Sample D Male 104.6

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