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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:110.8 nTPM
FANTOM5:197.5 Scaled Tags Per Million
Pig:10.0 nTPM

CAUDATE - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody CAB009438
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 110.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 110.8
Samples: 246

Max nTPM: 556.0
Min nTPM: 8.8
Std nTPM: 74.0
Median nTPM: 90.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 556.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 419.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 379.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 376.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 369.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 356.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 330.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 323.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 320.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 295.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 288.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 272.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 265.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 264.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 255.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 222.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 217.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 211.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 208.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 208.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 205.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 204.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 202.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 193.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 189.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 188.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 180.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 179.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 177.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 171.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 170.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 167.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 163.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 161.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 161.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 159.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 159.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 157.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 154.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 153.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 153.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 153.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 153.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 151.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 150.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 149.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 148.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 148.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 147.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 146.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 145.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 145.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 143.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 141.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 140.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 140.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 139.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 139.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 137.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 135.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 135.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 135.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 134.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 132.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 128.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 127.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 126.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 125.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 124.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 124.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 124.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 123.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 122.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 121.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 121.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 120.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 120.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 120.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 119.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 117.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 114.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 113.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 113.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 112.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 110.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 110.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 108.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 108.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 107.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 107.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 107.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 106.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 106.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 105.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 105.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 104.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 104.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 104.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 103.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 102.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 101.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 100.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 100.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 99.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 98.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 98.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 97.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 97.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 96.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 95.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 95.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 95.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 95.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 94.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 93.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 93.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 93.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 92.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 91.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 90.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 90.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 89.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 88.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 88.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 88.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 87.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 87.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 87.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 86.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 85.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 85.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 85.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 85.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 84.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 84.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 83.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 82.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 82.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 82.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 82.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 81.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 81.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 79.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 78.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 78.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 77.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 76.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 76.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 76.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 76.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 76.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 75.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 75.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 75.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 74.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 74.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 74.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 73.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 72.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 72.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 71.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 71.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 71.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 70.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 69.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 69.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 69.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 69.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 69.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 69.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 69.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 68.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 68.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 66.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 65.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 65.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 64.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 64.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 64.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 64.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 63.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 63.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 62.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 62.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 61.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 61.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 60.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 60.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 60.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 60.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 59.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 59.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 58.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 58.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 57.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 57.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 56.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 56.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 56.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 55.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 54.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 54.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 54.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 53.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 53.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 53.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 52.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 51.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 50.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 50.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 49.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 47.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 46.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 44.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 44.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 40.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 36.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 32.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 25.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 16.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 13.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 8.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 197.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 197.5
FF:10164-103B2 76 years, female 197.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 10.0
Pig sample Sample description nTPM
Caudate
nTPM: 10.0
Samples: 4

Max nTPM: 12.5
Min nTPM: 7.6
Sample A Female 7.6
Sample B Female 9.4
Sample C Male 12.5
Sample D Male 10.6

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