COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.8 nTPM
HPA:18.5 nTPM
GTEx:20.8 nTPM
FANTOM5:63.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA027378Antibody HPA027397
Endothelial cells MediumMedium
Glandular cells MediumMedium
Peripheral nerve/ganglion MediumMedium




COLON - HPA RNA-seqi
Average nTPM 18.5
overview
Male, age 54 		Colon sample 67
nTPM: 17.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 16.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 18.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 12
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 16.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 20.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 18.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 20.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 22
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 23.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 18.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 16.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 19.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 19.4
Samples: 373

Max nTPM: 37.3
Min nTPM: 8.0
Std nTPM: 4.8
Median nTPM: 19.1
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 37.3
GTEX-1AX9J-2526-SM-73KUY 60-69 years, male 36.0
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 35.1
GTEX-1LGRB-2026-SM-COH47 50-59 years, female 32.4
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 31.8
GTEX-1RMOY-1726-SM-EVYC9 50-59 years, male 31.7
GTEX-1MGNQ-2126-SM-EV7AC 40-49 years, male 31.5
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 31.3
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 31.3
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 30.9
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 30.6
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Colon - Transverse
Average nTPM: 20.8
Samples: 406

Max nTPM: 59.8
Min nTPM: 9.3
Std nTPM: 5.2
Median nTPM: 20.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 59.8
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 55.8
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 42.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 35.8
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 33.1
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 32.9
GTEX-1A3MV-1126-SM-718BS 30-39 years, male 32.8
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 32.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 31.3
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 31.3
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 31.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 63.9
FF:10014-101C5 62,83,84 years, mixed 63.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.