HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.8 nTPM
HPA:16.8 nTPM
GTEx:18.2 nTPM
FANTOM5:0.2 Scaled Tags Per Million
Pig:1.3 nTPM
Mouse:10.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015774Antibody HPA017888Antibody CAB015371
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
2148 Female, age 91, left hemisphere 20.4
2621 Female, age 67, right hemisphere 17.2
1855 Male, age 76, left hemisphere 14.1
1911 Female, age 85, right hemisphere 13.6
2529 Female, age 94, left hemisphere 12.2
1898 Male, age 80, left hemisphere 11.9
Dentate gyrus
nTPM: 16.2
2531 Female, age 67, both hemispheres 25.7
1927 Female, age 91, both hemispheres 17.6
2246 Female, age 85, both hemispheres 14.3
2528 Male, age 74, both hemispheres 13.8
2010 Male, age 76, both hemispheres 13.6
2530 Female, age 94, left hemisphere 12.3
Entorhinal gyrus
nTPM: 12.0
2686 Male, age 75, right hemisphere 12.6
1938 Female, age 85, left hemisphere 12.2
1787 Male, age 76, left hemisphere 11.8
2117 Female, age 91, right hemisphere 11.8
2764 Male, age 80, right hemisphere 11.7
2613 Female, age 94, left hemisphere 11.6
Hippocampus, CA1
nTPM: 15.3
2045 Male, age 76, both hemispheres 26.7
1873 Female, age 85, both hemispheres 14.8
2527 Male, age 74, both hemispheres 11.8
2749 Male, age 80, left hemisphere 11.7
2082 Female, age 91, right hemisphere 11.6
Hippocampus, CA2
nTPM: 12.0
1892 Male, age 76, both hemispheres 13.3
2437 Female, age 94, left hemisphere 12.3
1940 Female, age 85, left hemisphere 11.7
1963 Male, age 80, left hemisphere 11.6
2113 Female, age 91, right hemisphere 11.6
2249 Male, age 74, both hemispheres 11.6
Hippocampus, CA3
nTPM: 16.8
2620 Female, age 94, left hemisphere 26.9
2861 Female, age 67, both hemispheres 21.5
1891 Female, age 85, both hemispheres 14.1
1867 Male, age 76, both hemispheres 14.0
2137 Male, age 80, left hemisphere 12.6
2436 Male, age 74, both hemispheres 12.0
Parahippocampal cortex
nTPM: 12.6
2622 Female, age 67, right hemisphere 15.8
2532 Female, age 72, left hemisphere 13.6
2693 Female, age 94, both hemispheres 12.7
1933 Female, age 85, both hemispheres 12.5
2245 Female, age 91, both hemispheres 12.4
1850 Male, age 80, both hemispheres 12.2
2018 Male, age 76, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.8
2250 Female, age 67, right hemisphere 11.7
2692 Male, age 74, both hemispheres 11.6
Perirhinal gyrus
nTPM: 12.7
1841 Female, age 85, right hemisphere 13.1
1794 Male, age 80, right hemisphere 12.9
2521 Female, age 94, right hemisphere 12.9
2848 Male, age 76, right hemisphere 12.8
1847 Female, age 91, left hemisphere 11.6
Subiculum
nTPM: 11.8
2729 Female, age 91, right hemisphere 12.6
1977 Female, age 85, both hemispheres 11.8
2619 Male, age 74, both hemispheres 11.7
1901 Male, age 80, both hemispheres 11.6
2042 Male, age 76, both hemispheres 11.6
2438 Female, age 94, left hemisphere 11.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.2
Samples: 197

Max nTPM: 449.6
Min nTPM: 0.0
Std nTPM: 39.2
Median nTPM: 4.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 449.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 130.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 106.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 101.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 92.5
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 88.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 88.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 87.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 85.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 78.1
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 77.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.2
FF:10153-102I9 76 years, female 0.5
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.1
Sample A Female 0.3
Sample B Female 0.5
Sample C Male 0.1
Sample D Male 0.6
Entorhinal cortex
nTPM: 1.3
Samples: 4

Max nTPM: 1.8
Min nTPM: 0.9
Sample A Female 1.8
Sample B Female 1.7
Sample C Male 0.9
Sample D Male 0.9
Subiculum
nTPM: 0.2
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Female 0.2
Sample B Female 0.2
Sample C Male 0.1
Sample D Male 0.2
Ventral hippocampus
nTPM: 0.5
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.2
Sample A Female 0.6
Sample B Female 0.7
Sample C Male 0.6
Sample D Male 0.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 12.4
Min nTPM: 7.8
Sample A Male 11.9
Sample B Male 12.4
Sample C Female 7.8
Sample D Female 10.5
Hippocampal formation
nTPM: 3.2
Samples: 4

Max nTPM: 4.7
Min nTPM: 1.9
Sample A Male 4.2
Sample B Male 2.0
Sample C Female 1.9
Sample D Female 4.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74580996 Antisense, RP_060215_02_C12, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.