HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.2 nTPM
HPA:41.2 nTPM
GTEx:44.1 nTPM
FANTOM5:240.6 Scaled Tags Per Million
Pig:28.0 nTPM
Mouse:73.9 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB022085Antibody CAB025148
Glial cells MediumNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 31.3
1911 Female, age 85, right hemisphere 34.6
2621 Female, age 67, right hemisphere 33.7
2529 Female, age 94, left hemisphere 31.9
1855 Male, age 76, left hemisphere 31.2
1898 Male, age 80, left hemisphere 29.9
2148 Female, age 91, left hemisphere 26.5
Dentate gyrus
nTPM: 33.3
2010 Male, age 76, both hemispheres 44.0
2530 Female, age 94, left hemisphere 40.9
2528 Male, age 74, both hemispheres 33.4
2246 Female, age 85, both hemispheres 30.7
2531 Female, age 67, both hemispheres 25.7
1927 Female, age 91, both hemispheres 25.3
Entorhinal gyrus
nTPM: 32.9
2117 Female, age 91, right hemisphere 46.4
2764 Male, age 80, right hemisphere 36.4
2613 Female, age 94, left hemisphere 35.1
1787 Male, age 76, left hemisphere 27.5
1938 Female, age 85, left hemisphere 26.8
2686 Male, age 75, right hemisphere 25.3
Hippocampus, CA1
nTPM: 32.9
2045 Male, age 76, both hemispheres 42.2
2527 Male, age 74, both hemispheres 32.5
1873 Female, age 85, both hemispheres 30.7
2082 Female, age 91, right hemisphere 30.2
2749 Male, age 80, left hemisphere 28.6
Hippocampus, CA2
nTPM: 35.2
2249 Male, age 74, both hemispheres 41.3
1963 Male, age 80, left hemisphere 38.8
1892 Male, age 76, both hemispheres 35.4
2437 Female, age 94, left hemisphere 33.0
2113 Female, age 91, right hemisphere 32.8
1940 Female, age 85, left hemisphere 30.2
Hippocampus, CA3
nTPM: 33.5
2436 Male, age 74, both hemispheres 50.6
1867 Male, age 76, both hemispheres 43.8
1891 Female, age 85, both hemispheres 40.1
2137 Male, age 80, left hemisphere 24.2
2620 Female, age 94, left hemisphere 22.0
2861 Female, age 67, both hemispheres 20.4
Parahippocampal cortex
nTPM: 28.3
1990 Female, age 91, right hemisphere 34.0
2692 Male, age 74, both hemispheres 33.2
2018 Male, age 76, both hemispheres 32.1
2532 Female, age 72, left hemisphere 32.1
1850 Male, age 80, both hemispheres 29.1
2693 Female, age 94, both hemispheres 27.6
2245 Female, age 91, both hemispheres 27.3
1933 Female, age 85, both hemispheres 26.5
2250 Female, age 67, right hemisphere 22.9
2622 Female, age 67, right hemisphere 17.9
Perirhinal gyrus
nTPM: 22.7
2848 Male, age 76, right hemisphere 25.0
2521 Female, age 94, right hemisphere 23.6
1841 Female, age 85, right hemisphere 22.6
1794 Male, age 80, right hemisphere 21.4
1847 Female, age 91, left hemisphere 21.2
Subiculum
nTPM: 41.2
2042 Male, age 76, both hemispheres 60.7
2438 Female, age 94, left hemisphere 44.1
1901 Male, age 80, both hemispheres 43.8
1977 Female, age 85, both hemispheres 37.4
2619 Male, age 74, both hemispheres 32.5
2729 Female, age 91, right hemisphere 28.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.1
Samples: 197

Max nTPM: 259.9
Min nTPM: 5.2
Std nTPM: 36.5
Median nTPM: 33.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 259.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 233.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 173.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 165.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 154.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 138.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 137.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 120.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 119.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 115.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 114.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 240.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 240.6
FF:10153-102I9 76 years, female 248.9
FF:10169-103B7 60 years, female 232.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 33.6
Min nTPM: 20.4
Sample A Female 33.6
Sample B Female 25.9
Sample C Male 32.1
Sample D Male 20.4
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 26.7
Min nTPM: 21.2
Sample A Female 26.7
Sample B Female 25.9
Sample C Male 21.4
Sample D Male 21.2
Subiculum
nTPM: 23.1
Samples: 4

Max nTPM: 26.8
Min nTPM: 17.2
Sample A Female 23.6
Sample B Female 17.2
Sample C Male 26.8
Sample D Male 24.9
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 32.0
Min nTPM: 20.8
Sample A Female 27.4
Sample B Female 20.8
Sample C Male 32.0
Sample D Male 23.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 44.2
Min nTPM: 37.3
Sample A Male 37.3
Sample B Male 43.6
Sample C Female 44.2
Sample D Female 39.7
Hippocampal formation
nTPM: 73.9
Samples: 4

Max nTPM: 102.0
Min nTPM: 41.2
Sample A Male 41.2
Sample B Male 60.1
Sample C Female 102.0
Sample D Female 92.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
79903782 Antisense, RP_071204_02_C01, Mouse strain C57BL/6J (56 days, male) 3.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.