COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.6 nTPM
HPA:24.6 nTPM
GTEx:15.5 nTPM
FANTOM5:90.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA013189
Endothelial cells High
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 24.6
overview
Male, age 54 		Colon sample 67
nTPM: 21.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 17.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 13.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 26.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 47.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 23.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 14.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 21.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 27
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 22.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 20.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 32.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 31.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 15.5
Samples: 373

Max nTPM: 62.4
Min nTPM: 2.4
Std nTPM: 8.0
Median nTPM: 13.1
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 62.4
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 49.0
GTEX-1LSNL-1626-SM-E9TJY 50-59 years, male 45.1
GTEX-16Z82-2426-SM-7KUMS 60-69 years, male 41.1
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 40.9
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 37.7
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 37.4
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 36.7
GTEX-1F75W-2126-SM-7RHIA 60-69 years, male 35.5
GTEX-18A6Q-2226-SM-7LG61 60-69 years, male 35.3
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 35.1
Show allShow less
Colon - Transverse
Average nTPM: 15.3
Samples: 406

Max nTPM: 58.4
Min nTPM: 3.0
Std nTPM: 9.8
Median nTPM: 12.0
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 58.4
GTEX-144GL-2526-SM-5TDDL 50-59 years, male 53.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 53.1
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 51.5
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 51.1
GTEX-1GZ4I-2426-SM-9WPPP 50-59 years, male 50.8
GTEX-R45C-2126-SM-EZ6KZ 60-69 years, female 49.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 47.7
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 45.8
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 42.9
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 42.9
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 90.2
FF:10014-101C5 62,83,84 years, mixed 90.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.