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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:472.6 nTPM
HPA:472.6 nTPM
GTEx:2043.6 nTPM
FANTOM5:3683.6 Scaled Tags Per Million
Pig:627.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 472.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 429.4
1981 Female, age 72, midline 561.9
2048 Male, age 55, midline 450.8
2194 Female, age 79, both hemispheres 399.9
2816 Male, age 47, midline 377.1
2565 Male, age 75, midline 357.4
Cervical spinal cord, dorsal horn
nTPM: 453.4
2173 Female, age 72, unknown 735.0
2296 Male, age 66, both hemispheres 506.0
2069 Male, age 47, both hemispheres 485.6
1877 Male, age 55, unknown 406.1
2721 Male, age 90, both hemispheres 314.1
2297 Male, age 75, both hemispheres 273.4
Cervical spinal cord, ventral horn
nTPM: 472.6
2098 Female, age 72, unknown 662.3
2068 Male, age 55, unknown 493.9
2480 Male, age 75, both hemispheres 456.6
2809 Male, age 90, both hemispheres 430.8
2820 Female, age 79, both hemispheres 399.1
2295 Male, age 66, both hemispheres 392.7

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2043.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 2043.6
Samples: 159

Max nTPM: 9559.1
Min nTPM: 540.1
Std nTPM: 1126.5
Median nTPM: 1788.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 9559.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 6244.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 5452.6
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 5414.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 5368.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 4306.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 3842.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 3784.6
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 3717.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 3708.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 3695.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 3682.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 3516.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 3488.8
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 3422.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 3399.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 3397.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 3321.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 3281.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 3068.4
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 3012.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 2880.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 2820.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 2793.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 2775.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2720.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 2675.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 2672.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2666.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2649.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 2627.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 2600.4
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 2554.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 2542.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2521.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 2482.6
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2456.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 2408.7
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2400.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 2398.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 2361.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2344.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 2329.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 2275.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 2227.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 2225.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 2195.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 2155.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 2143.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 2141.7
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 2135.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2119.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2105.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 2086.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 2080.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 2056.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2054.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 2050.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 2043.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 2025.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 2020.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2015.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1998.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1989.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1963.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1956.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1954.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1942.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1916.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1915.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1915.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1903.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1900.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1859.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1849.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1839.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1828.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1826.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1819.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1788.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1787.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1768.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1765.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1762.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1755.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1754.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1745.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 1744.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1741.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1737.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1720.5
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1719.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1718.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1706.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1694.0
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1654.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 1639.8
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 1636.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1632.4
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1629.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1628.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1596.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1586.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1580.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1547.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1547.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1542.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1520.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1504.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1499.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 1493.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1489.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1488.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1430.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1427.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1424.1
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 1413.7
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1399.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1384.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1361.7
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1347.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1313.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1309.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1307.1
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1301.2
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1299.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1291.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1272.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1265.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1257.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1244.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1230.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1229.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1187.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1164.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1162.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1156.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1140.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1139.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1111.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1108.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1073.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 1073.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1044.8
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1041.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1040.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 1000.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 938.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 936.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 857.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 849.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 843.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 754.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 669.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 668.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 666.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 637.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 575.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 540.1
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 3683.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 3683.6
FF:10159-103A6 76 years, female 4292.0
FF:10181-103D1 60 years, female 3075.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 627.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 462.3
Samples: 4

Max nTPM: 534.7
Min nTPM: 412.8
Sample A Female 422.5
Sample B Female 534.7
Sample C Male 412.8
Sample D Male 479.3
Ventral spinal cord
nTPM: 627.3
Samples: 4

Max nTPM: 691.8
Min nTPM: 531.7
Sample A Female 628.0
Sample B Female 691.8
Sample C Male 531.7
Sample D Male 657.8

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