HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:62.3 nTPM
HPA:62.3 nTPM
GTEx:48.1 nTPM
FANTOM5:114.3 Scaled Tags Per Million
Pig:70.7 nTPM
Mouse:131.3 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019352Antibody HPA024099Antibody HPA030387
Glial cells MediumNot detectedNot detected
Neuronal cells HighLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.3
Sample id Sample description nTPM
Hippocampus
nTPM: 32.6
1898 Male, age 80, left hemisphere 44.6
1911 Female, age 85, right hemisphere 37.7
2621 Female, age 67, right hemisphere 34.7
2529 Female, age 94, left hemisphere 28.0
1855 Male, age 76, left hemisphere 27.5
2148 Female, age 91, left hemisphere 23.5
Dentate gyrus
nTPM: 33.2
2246 Female, age 85, both hemispheres 42.6
2531 Female, age 67, both hemispheres 37.9
2010 Male, age 76, both hemispheres 33.1
1927 Female, age 91, both hemispheres 31.7
2530 Female, age 94, left hemisphere 28.0
2528 Male, age 74, both hemispheres 25.8
Entorhinal gyrus
nTPM: 53.0
1938 Female, age 85, left hemisphere 74.3
2764 Male, age 80, right hemisphere 62.0
2613 Female, age 94, left hemisphere 60.1
1787 Male, age 76, left hemisphere 51.6
2686 Male, age 75, right hemisphere 36.1
2117 Female, age 91, right hemisphere 33.7
Hippocampus, CA1
nTPM: 38.9
2749 Male, age 80, left hemisphere 62.3
2082 Female, age 91, right hemisphere 35.2
1873 Female, age 85, both hemispheres 34.4
2527 Male, age 74, both hemispheres 33.0
2045 Male, age 76, both hemispheres 29.8
Hippocampus, CA2
nTPM: 34.6
1892 Male, age 76, both hemispheres 41.6
1940 Female, age 85, left hemisphere 35.7
2437 Female, age 94, left hemisphere 34.4
2113 Female, age 91, right hemisphere 33.9
1963 Male, age 80, left hemisphere 31.4
2249 Male, age 74, both hemispheres 30.3
Hippocampus, CA3
nTPM: 43.6
2137 Male, age 80, left hemisphere 68.4
1867 Male, age 76, both hemispheres 47.6
1891 Female, age 85, both hemispheres 44.7
2436 Male, age 74, both hemispheres 34.8
2620 Female, age 94, left hemisphere 33.2
2861 Female, age 67, both hemispheres 32.6
Parahippocampal cortex
nTPM: 48.8
1933 Female, age 85, both hemispheres 65.1
1850 Male, age 80, both hemispheres 65.0
1990 Female, age 91, right hemisphere 56.0
2250 Female, age 67, right hemisphere 50.7
2693 Female, age 94, both hemispheres 48.0
2245 Female, age 91, both hemispheres 47.8
2532 Female, age 72, left hemisphere 47.3
2018 Male, age 76, both hemispheres 40.5
2622 Female, age 67, right hemisphere 36.8
2692 Male, age 74, both hemispheres 30.3
Perirhinal gyrus
nTPM: 62.3
1847 Female, age 91, left hemisphere 81.1
1841 Female, age 85, right hemisphere 64.3
2848 Male, age 76, right hemisphere 60.6
1794 Male, age 80, right hemisphere 55.6
2521 Female, age 94, right hemisphere 49.9
Subiculum
nTPM: 41.9
1977 Female, age 85, both hemispheres 61.2
1901 Male, age 80, both hemispheres 55.7
2438 Female, age 94, left hemisphere 45.2
2042 Male, age 76, both hemispheres 35.4
2619 Male, age 74, both hemispheres 29.8
2729 Female, age 91, right hemisphere 24.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.1
Samples: 197

Max nTPM: 237.7
Min nTPM: 0.4
Std nTPM: 35.0
Median nTPM: 42.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 237.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 162.4
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 131.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 125.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 125.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 125.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 117.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 111.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 111.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 109.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 108.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.3
FF:10169-103B7 60 years, female 140.2
FF:10153-102I9 76 years, female 88.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 41.6
Samples: 4

Max nTPM: 53.5
Min nTPM: 26.8
Sample A Female 39.5
Sample B Female 46.4
Sample C Male 53.5
Sample D Male 26.8
Entorhinal cortex
nTPM: 57.5
Samples: 4

Max nTPM: 63.3
Min nTPM: 50.6
Sample A Female 63.3
Sample B Female 50.6
Sample C Male 61.7
Sample D Male 54.3
Subiculum
nTPM: 70.7
Samples: 4

Max nTPM: 80.4
Min nTPM: 62.5
Sample A Female 80.4
Sample B Female 62.5
Sample C Male 71.4
Sample D Male 68.3
Ventral hippocampus
nTPM: 51.8
Samples: 4

Max nTPM: 67.8
Min nTPM: 41.1
Sample A Female 67.8
Sample B Female 48.5
Sample C Male 49.9
Sample D Male 41.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.3
Samples: 4

Max nTPM: 175.9
Min nTPM: 111.1
Sample A Male 111.1
Sample B Male 124.5
Sample C Female 113.8
Sample D Female 175.9
Hippocampal formation
nTPM: 78.0
Samples: 4

Max nTPM: 93.9
Min nTPM: 67.8
Sample A Male 93.9
Sample B Male 80.8
Sample C Female 69.3
Sample D Female 67.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
74047444 Antisense, RP_051214_01_G06, Mouse strain C57BL/6J (56 days, male) 6.5
70276867 Antisense, RP_050531_01_E01, Mouse strain C57BL/6J (56 days, male) 2.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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