HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:15.7 nTPM
HPA:15.7 nTPM
GTEx:17.2 nTPM
FANTOM5:8.7 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:105.4 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.7
Sample id Sample description nTPM
Hippocampus
nTPM: 12.9
1911 Female, age 85, right hemisphere 14.7
1898 Male, age 80, left hemisphere 14.6
2148 Female, age 91, left hemisphere 13.6
2621 Female, age 67, right hemisphere 13.5
1855 Male, age 76, left hemisphere 11.3
2529 Female, age 94, left hemisphere 9.5
Dentate gyrus
nTPM: 13.9
2531 Female, age 67, both hemispheres 17.3
1927 Female, age 91, both hemispheres 16.7
2528 Male, age 74, both hemispheres 12.9
2530 Female, age 94, left hemisphere 12.8
2010 Male, age 76, both hemispheres 12.2
2246 Female, age 85, both hemispheres 11.5
Entorhinal gyrus
nTPM: 11.2
1938 Female, age 85, left hemisphere 13.3
2613 Female, age 94, left hemisphere 12.3
2764 Male, age 80, right hemisphere 10.9
2686 Male, age 75, right hemisphere 10.8
2117 Female, age 91, right hemisphere 10.3
1787 Male, age 76, left hemisphere 9.4
Hippocampus, CA1
nTPM: 13.2
2749 Male, age 80, left hemisphere 18.5
1873 Female, age 85, both hemispheres 17.2
2045 Male, age 76, both hemispheres 12.6
2527 Male, age 74, both hemispheres 9.0
2082 Female, age 91, right hemisphere 8.8
Hippocampus, CA2
nTPM: 12.0
1940 Female, age 85, left hemisphere 14.2
1963 Male, age 80, left hemisphere 14.1
2249 Male, age 74, both hemispheres 12.7
1892 Male, age 76, both hemispheres 11.0
2437 Female, age 94, left hemisphere 11.0
2113 Female, age 91, right hemisphere 8.9
Hippocampus, CA3
nTPM: 15.7
2620 Female, age 94, left hemisphere 25.3
2861 Female, age 67, both hemispheres 16.5
2137 Male, age 80, left hemisphere 16.0
1891 Female, age 85, both hemispheres 13.1
1867 Male, age 76, both hemispheres 13.0
2436 Male, age 74, both hemispheres 10.5
Parahippocampal cortex
nTPM: 11.0
2693 Female, age 94, both hemispheres 13.5
1990 Female, age 91, right hemisphere 12.9
1933 Female, age 85, both hemispheres 11.9
1850 Male, age 80, both hemispheres 11.8
2622 Female, age 67, right hemisphere 11.0
2245 Female, age 91, both hemispheres 10.5
2532 Female, age 72, left hemisphere 10.5
2692 Male, age 74, both hemispheres 10.2
2018 Male, age 76, both hemispheres 9.5
2250 Female, age 67, right hemisphere 7.8
Perirhinal gyrus
nTPM: 11.8
1841 Female, age 85, right hemisphere 14.2
2521 Female, age 94, right hemisphere 13.9
1794 Male, age 80, right hemisphere 12.2
1847 Female, age 91, left hemisphere 10.8
2848 Male, age 76, right hemisphere 8.1
Subiculum
nTPM: 12.3
1901 Male, age 80, both hemispheres 14.3
2042 Male, age 76, both hemispheres 14.1
1977 Female, age 85, both hemispheres 13.1
2729 Female, age 91, right hemisphere 11.3
2619 Male, age 74, both hemispheres 10.8
2438 Female, age 94, left hemisphere 10.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.2
Samples: 197

Max nTPM: 54.6
Min nTPM: 3.7
Std nTPM: 7.4
Median nTPM: 15.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 39.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 36.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 36.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 35.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 34.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 33.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 32.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 32.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 31.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.7
FF:10153-102I9 76 years, female 10.2
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 34.1
Min nTPM: 30.2
Sample A Female 30.2
Sample B Female 32.5
Sample C Male 31.5
Sample D Male 34.1
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 34.6
Min nTPM: 21.5
Sample A Female 24.7
Sample B Female 34.6
Sample C Male 23.4
Sample D Male 21.5
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 18.7
Min nTPM: 12.3
Sample A Female 18.7
Sample B Female 12.3
Sample C Male 13.8
Sample D Male 12.4
Ventral hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 28.0
Min nTPM: 17.0
Sample A Female 20.0
Sample B Female 17.0
Sample C Male 20.5
Sample D Male 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 96.0
Samples: 4

Max nTPM: 101.4
Min nTPM: 87.9
Sample A Male 98.8
Sample B Male 101.4
Sample C Female 95.7
Sample D Female 87.9
Hippocampal formation
nTPM: 105.5
Samples: 4

Max nTPM: 134.1
Min nTPM: 88.4
Sample A Male 88.4
Sample B Male 104.7
Sample C Female 134.1
Sample D Female 94.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
70593169 Antisense, RP_050407_01_F05, Mouse strain C57BL/6J (56 days, male) 12.9
70795847 Antisense, RP_050712_02_B02, Mouse strain C57BL/6J (56 days, male) 6.0

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