HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:72.6 nTPM
HPA:72.6 nTPM
GTEx:65.4 nTPM
FANTOM5:85.0 Scaled Tags Per Million
Pig:26.5 nTPM
Mouse:53.6 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004798
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.6
Sample id Sample description nTPM
Hippocampus
nTPM: 68.5
2529 Female, age 94, left hemisphere 78.8
1855 Male, age 76, left hemisphere 71.2
1898 Male, age 80, left hemisphere 69.2
1911 Female, age 85, right hemisphere 69.0
2148 Female, age 91, left hemisphere 62.5
2621 Female, age 67, right hemisphere 60.2
Dentate gyrus
nTPM: 68.0
2530 Female, age 94, left hemisphere 88.0
2010 Male, age 76, both hemispheres 78.7
2528 Male, age 74, both hemispheres 73.2
2246 Female, age 85, both hemispheres 61.4
2531 Female, age 67, both hemispheres 55.6
1927 Female, age 91, both hemispheres 51.4
Entorhinal gyrus
nTPM: 67.4
2117 Female, age 91, right hemisphere 86.6
1787 Male, age 76, left hemisphere 67.7
2764 Male, age 80, right hemisphere 66.5
2686 Male, age 75, right hemisphere 64.5
1938 Female, age 85, left hemisphere 60.5
2613 Female, age 94, left hemisphere 58.5
Hippocampus, CA1
nTPM: 63.8
2527 Male, age 74, both hemispheres 68.9
1873 Female, age 85, both hemispheres 63.9
2749 Male, age 80, left hemisphere 63.1
2082 Female, age 91, right hemisphere 63.0
2045 Male, age 76, both hemispheres 60.2
Hippocampus, CA2
nTPM: 66.3
2249 Male, age 74, both hemispheres 71.8
1963 Male, age 80, left hemisphere 71.0
1940 Female, age 85, left hemisphere 68.1
2437 Female, age 94, left hemisphere 67.3
2113 Female, age 91, right hemisphere 65.8
1892 Male, age 76, both hemispheres 54.0
Hippocampus, CA3
nTPM: 60.1
1891 Female, age 85, both hemispheres 71.3
1867 Male, age 76, both hemispheres 62.0
2137 Male, age 80, left hemisphere 59.6
2436 Male, age 74, both hemispheres 56.6
2620 Female, age 94, left hemisphere 56.6
2861 Female, age 67, both hemispheres 54.8
Parahippocampal cortex
nTPM: 60.2
2692 Male, age 74, both hemispheres 73.4
2018 Male, age 76, both hemispheres 66.4
1990 Female, age 91, right hemisphere 62.1
2532 Female, age 72, left hemisphere 62.0
1933 Female, age 85, both hemispheres 59.3
1850 Male, age 80, both hemispheres 58.2
2245 Female, age 91, both hemispheres 56.7
2622 Female, age 67, right hemisphere 55.7
2250 Female, age 67, right hemisphere 55.5
2693 Female, age 94, both hemispheres 52.5
Perirhinal gyrus
nTPM: 53.2
2848 Male, age 76, right hemisphere 56.7
1794 Male, age 80, right hemisphere 53.8
2521 Female, age 94, right hemisphere 52.5
1841 Female, age 85, right hemisphere 51.7
1847 Female, age 91, left hemisphere 51.3
Subiculum
nTPM: 72.6
2042 Male, age 76, both hemispheres 84.7
1901 Male, age 80, both hemispheres 76.0
2619 Male, age 74, both hemispheres 70.7
2729 Female, age 91, right hemisphere 70.0
1977 Female, age 85, both hemispheres 69.2
2438 Female, age 94, left hemisphere 64.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.4
Samples: 197

Max nTPM: 173.5
Min nTPM: 21.7
Std nTPM: 28.3
Median nTPM: 59.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 173.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 144.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 142.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 136.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 134.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 132.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 132.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 130.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 128.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 128.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 126.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.0
FF:10153-102I9 76 years, female 121.9
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 37.0
Min nTPM: 13.5
Sample A Female 37.0
Sample B Female 22.4
Sample C Male 33.1
Sample D Male 13.5
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 16.7
Min nTPM: 14.1
Sample A Female 14.1
Sample B Female 16.7
Sample C Male 14.4
Sample D Male 14.2
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 17.8
Min nTPM: 15.0
Sample A Female 17.8
Sample B Female 16.8
Sample C Male 15.0
Sample D Male 15.1
Ventral hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 25.6
Min nTPM: 15.3
Sample A Female 21.0
Sample B Female 15.3
Sample C Male 22.3
Sample D Male 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.6
Samples: 4

Max nTPM: 56.7
Min nTPM: 47.6
Sample A Male 53.8
Sample B Male 47.6
Sample C Female 56.4
Sample D Female 56.7
Hippocampal formation
nTPM: 46.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 37.9
Sample A Male 57.7
Sample B Male 42.6
Sample C Female 37.9
Sample D Female 49.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
70474911 Antisense, RP_050623_01_D01, Mouse strain C57BL/6J (56 days, male) 9.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.