HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.6 nTPM
HPA:31.6 nTPM
GTEx:40.8 nTPM
FANTOM5:17.8 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:31.4 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050270
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.6
Sample id Sample description nTPM
Hippocampus
nTPM: 30.6
1898 Male, age 80, left hemisphere 31.3
2529 Female, age 94, left hemisphere 31.1
1855 Male, age 76, left hemisphere 30.7
2621 Female, age 67, right hemisphere 30.6
1911 Female, age 85, right hemisphere 30.1
2148 Female, age 91, left hemisphere 30.0
Dentate gyrus
nTPM: 30.1
2530 Female, age 94, left hemisphere 33.3
2010 Male, age 76, both hemispheres 30.7
2528 Male, age 74, both hemispheres 30.5
1927 Female, age 91, both hemispheres 29.5
2246 Female, age 85, both hemispheres 28.3
2531 Female, age 67, both hemispheres 28.2
Entorhinal gyrus
nTPM: 31.6
2613 Female, age 94, left hemisphere 32.6
2686 Male, age 75, right hemisphere 32.5
2764 Male, age 80, right hemisphere 31.8
1938 Female, age 85, left hemisphere 31.1
2117 Female, age 91, right hemisphere 30.8
1787 Male, age 76, left hemisphere 30.6
Hippocampus, CA1
nTPM: 29.3
1873 Female, age 85, both hemispheres 30.2
2749 Male, age 80, left hemisphere 29.9
2527 Male, age 74, both hemispheres 29.3
2082 Female, age 91, right hemisphere 29.0
2045 Male, age 76, both hemispheres 28.3
Hippocampus, CA2
nTPM: 30.6
1963 Male, age 80, left hemisphere 32.3
2437 Female, age 94, left hemisphere 32.2
1940 Female, age 85, left hemisphere 30.8
1892 Male, age 76, both hemispheres 30.1
2113 Female, age 91, right hemisphere 29.2
2249 Male, age 74, both hemispheres 29.0
Hippocampus, CA3
nTPM: 30.0
2861 Female, age 67, both hemispheres 33.2
2436 Male, age 74, both hemispheres 30.3
2620 Female, age 94, left hemisphere 30.3
1867 Male, age 76, both hemispheres 29.2
1891 Female, age 85, both hemispheres 29.1
2137 Male, age 80, left hemisphere 27.9
Parahippocampal cortex
nTPM: 29.4
2692 Male, age 74, both hemispheres 31.4
1933 Female, age 85, both hemispheres 31.1
2622 Female, age 67, right hemisphere 31.0
1850 Male, age 80, both hemispheres 30.0
2018 Male, age 76, both hemispheres 29.8
2532 Female, age 72, left hemisphere 29.5
2245 Female, age 91, both hemispheres 28.2
1990 Female, age 91, right hemisphere 28.1
2693 Female, age 94, both hemispheres 27.5
2250 Female, age 67, right hemisphere 27.4
Perirhinal gyrus
nTPM: 28.6
1847 Female, age 91, left hemisphere 29.8
1794 Male, age 80, right hemisphere 29.7
1841 Female, age 85, right hemisphere 28.2
2848 Male, age 76, right hemisphere 28.0
2521 Female, age 94, right hemisphere 27.4
Subiculum
nTPM: 29.6
2619 Male, age 74, both hemispheres 32.6
1901 Male, age 80, both hemispheres 30.3
2729 Female, age 91, right hemisphere 30.0
2042 Male, age 76, both hemispheres 29.7
1977 Female, age 85, both hemispheres 29.3
2438 Female, age 94, left hemisphere 25.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.8
Samples: 197

Max nTPM: 96.4
Min nTPM: 16.4
Std nTPM: 10.3
Median nTPM: 38.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 96.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 66.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 64.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 61.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 60.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 60.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 60.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 59.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 59.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.8
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 14.0
Min nTPM: 7.8
Sample A Female 14.0
Sample B Female 11.1
Sample C Male 9.1
Sample D Male 7.8
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.6
Sample A Female 9.2
Sample B Female 9.8
Sample C Male 10.0
Sample D Male 8.6
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 12.5
Min nTPM: 8.8
Sample A Female 12.5
Sample B Female 9.4
Sample C Male 9.3
Sample D Male 8.8
Ventral hippocampus
nTPM: 11.0
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.5
Sample A Female 12.4
Sample B Female 8.5
Sample C Male 13.2
Sample D Male 9.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.8
Samples: 4

Max nTPM: 33.1
Min nTPM: 28.8
Sample A Male 31.0
Sample B Male 33.1
Sample C Female 30.4
Sample D Female 28.8
Hippocampal formation
nTPM: 31.4
Samples: 4

Max nTPM: 35.3
Min nTPM: 26.5
Sample A Male 31.7
Sample B Male 26.5
Sample C Female 32.1
Sample D Female 35.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68080683 Antisense, RP_040929_01_E01, Mouse strain C57BL/6J (56 days, male) 0.9

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