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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:208.5 nTPM
FANTOM5:199.3 Scaled Tags Per Million
Pig:24.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA020291
Glial cells Low
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 208.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 208.5
Samples: 246

Max nTPM: 667.5
Min nTPM: 78.0
Std nTPM: 75.1
Median nTPM: 190.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 667.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 538.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 490.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 466.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 434.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 425.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 417.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 415.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 381.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 344.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 337.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 329.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 325.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 323.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 319.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 319.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 318.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 315.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 311.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 304.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 303.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 300.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 298.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 292.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 289.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 288.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 285.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 282.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 280.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 280.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 279.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 278.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 274.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 273.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 271.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 271.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 271.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 270.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 270.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 270.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 270.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 263.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 261.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 259.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 257.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 255.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 255.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 255.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 254.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 253.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 253.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 253.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 253.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 249.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 249.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 248.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 247.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 247.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 247.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 242.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 242.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 242.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 241.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 240.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 240.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 236.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 234.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 234.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 233.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 232.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 232.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 232.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 229.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 229.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 227.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 226.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 225.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 224.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 223.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 223.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 223.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 221.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 219.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 219.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 217.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 217.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 215.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 215.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 215.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 214.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 214.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 212.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 212.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 211.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 210.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 208.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 206.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 206.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 206.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 206.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 206.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 206.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 205.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 204.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 204.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 204.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 203.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 202.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 200.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 200.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 199.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 198.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 197.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 197.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 195.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 194.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 194.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 194.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 191.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 191.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 191.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 191.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 190.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 190.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 187.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 186.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 186.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 186.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 186.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 185.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 185.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 185.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 185.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 184.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 183.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 183.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 183.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 183.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 183.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 182.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 182.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 182.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 182.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 182.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 181.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 181.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 181.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 181.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 180.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 180.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 179.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 178.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 178.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 177.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 176.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 176.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 176.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 174.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 173.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 173.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 173.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 172.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 171.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 171.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 171.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 171.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 170.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 168.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 168.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 167.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 167.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 165.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 164.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 164.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 164.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 163.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 162.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 162.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 162.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 161.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 161.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 161.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 160.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 160.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 160.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 160.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 159.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 158.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 158.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 157.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 157.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 156.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 155.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 154.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 153.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 151.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 150.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 149.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 148.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 148.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 147.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 147.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 147.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 147.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 146.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 146.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 145.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 145.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 145.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 145.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 145.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 144.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 144.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 142.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 140.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 140.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 139.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 139.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 138.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 136.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 136.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 135.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 134.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 134.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 134.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 133.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 130.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 129.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 128.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 127.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 127.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 123.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 121.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 120.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 120.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 117.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 115.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 112.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 109.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 109.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 105.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 99.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 96.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 78.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 199.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 199.3
FF:10164-103B2 76 years, female 199.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 24.0
Pig sample Sample description nTPM
Caudate
nTPM: 24.0
Samples: 4

Max nTPM: 28.8
Min nTPM: 20.2
Sample A Female 20.2
Sample B Female 21.8
Sample C Male 25.1
Sample D Male 28.8

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