HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.3 nTPM
HPA:26.3 nTPM
GTEx:16.4 nTPM
FANTOM5:17.5 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:15.5 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.5
1911 Female, age 85, right hemisphere 27.6
2529 Female, age 94, left hemisphere 27.4
1855 Male, age 76, left hemisphere 26.5
1898 Male, age 80, left hemisphere 24.4
2621 Female, age 67, right hemisphere 24.1
2148 Female, age 91, left hemisphere 23.1
Dentate gyrus
nTPM: 26.3
2010 Male, age 76, both hemispheres 30.0
2528 Male, age 74, both hemispheres 27.4
2246 Female, age 85, both hemispheres 26.3
2530 Female, age 94, left hemisphere 25.4
1927 Female, age 91, both hemispheres 24.7
2531 Female, age 67, both hemispheres 24.2
Entorhinal gyrus
nTPM: 25.9
2117 Female, age 91, right hemisphere 27.3
2764 Male, age 80, right hemisphere 26.0
2686 Male, age 75, right hemisphere 25.7
1787 Male, age 76, left hemisphere 25.6
1938 Female, age 85, left hemisphere 25.4
2613 Female, age 94, left hemisphere 25.1
Hippocampus, CA1
nTPM: 26.0
2082 Female, age 91, right hemisphere 28.1
2045 Male, age 76, both hemispheres 27.9
2527 Male, age 74, both hemispheres 25.7
1873 Female, age 85, both hemispheres 24.9
2749 Male, age 80, left hemisphere 23.4
Hippocampus, CA2
nTPM: 26.3
2113 Female, age 91, right hemisphere 27.5
1892 Male, age 76, both hemispheres 27.1
2249 Male, age 74, both hemispheres 26.6
1963 Male, age 80, left hemisphere 26.1
2437 Female, age 94, left hemisphere 25.7
1940 Female, age 85, left hemisphere 24.8
Hippocampus, CA3
nTPM: 25.2
1867 Male, age 76, both hemispheres 28.0
1891 Female, age 85, both hemispheres 27.0
2620 Female, age 94, left hemisphere 24.6
2436 Male, age 74, both hemispheres 24.5
2137 Male, age 80, left hemisphere 24.4
2861 Female, age 67, both hemispheres 22.5
Parahippocampal cortex
nTPM: 26.3
2018 Male, age 76, both hemispheres 28.9
2532 Female, age 72, left hemisphere 27.3
2693 Female, age 94, both hemispheres 27.3
1933 Female, age 85, both hemispheres 27.2
2250 Female, age 67, right hemisphere 26.5
2692 Male, age 74, both hemispheres 26.1
1990 Female, age 91, right hemisphere 25.7
1850 Male, age 80, both hemispheres 25.2
2622 Female, age 67, right hemisphere 24.4
2245 Female, age 91, both hemispheres 24.0
Perirhinal gyrus
nTPM: 25.8
2848 Male, age 76, right hemisphere 27.9
2521 Female, age 94, right hemisphere 25.7
1841 Female, age 85, right hemisphere 25.5
1847 Female, age 91, left hemisphere 25.2
1794 Male, age 80, right hemisphere 25.0
Subiculum
nTPM: 26.3
2729 Female, age 91, right hemisphere 27.6
2042 Male, age 76, both hemispheres 26.7
2438 Female, age 94, left hemisphere 26.4
1901 Male, age 80, both hemispheres 26.2
1977 Female, age 85, both hemispheres 25.9
2619 Male, age 74, both hemispheres 25.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.4
Samples: 197

Max nTPM: 38.7
Min nTPM: 9.4
Std nTPM: 3.6
Median nTPM: 16.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 38.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 32.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 27.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 27.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 23.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 23.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 22.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 22.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.5
FF:10153-102I9 76 years, female 19.4
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 13.3
Min nTPM: 12.1
Sample A Female 13.3
Sample B Female 13.0
Sample C Male 13.0
Sample D Male 12.1
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.4
Sample A Female 11.7
Sample B Female 13.4
Sample C Male 12.6
Sample D Male 11.4
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 12.5
Min nTPM: 11.0
Sample A Female 12.1
Sample B Female 12.5
Sample C Male 11.0
Sample D Male 12.4
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 13.2
Min nTPM: 12.4
Sample A Female 12.6
Sample B Female 12.4
Sample C Male 12.8
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.8
Sample A Male 12.7
Sample B Male 12.6
Sample C Female 15.2
Sample D Female 10.8
Hippocampal formation
nTPM: 15.5
Samples: 4

Max nTPM: 17.9
Min nTPM: 12.7
Sample A Male 15.2
Sample B Male 16.1
Sample C Female 17.9
Sample D Female 12.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68410476 Antisense, RP_041214_02_A02, Mouse strain C57BL/6J (56 days, male) 1.4

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