HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:34.3 nTPM
HPA:34.3 nTPM
GTEx:42.0 nTPM
FANTOM5:14.4 Scaled Tags Per Million
Pig:30.9 nTPM
Mouse:19.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.3
Sample id Sample description nTPM
Hippocampus
nTPM: 32.1
2529 Female, age 94, left hemisphere 34.6
1898 Male, age 80, left hemisphere 33.3
2148 Female, age 91, left hemisphere 31.7
1911 Female, age 85, right hemisphere 31.5
1855 Male, age 76, left hemisphere 31.4
2621 Female, age 67, right hemisphere 30.0
Dentate gyrus
nTPM: 30.8
2010 Male, age 76, both hemispheres 33.9
2528 Male, age 74, both hemispheres 32.5
2530 Female, age 94, left hemisphere 30.7
2246 Female, age 85, both hemispheres 30.6
1927 Female, age 91, both hemispheres 29.8
2531 Female, age 67, both hemispheres 27.2
Entorhinal gyrus
nTPM: 30.3
2117 Female, age 91, right hemisphere 35.1
2686 Male, age 75, right hemisphere 32.1
1787 Male, age 76, left hemisphere 31.9
1938 Female, age 85, left hemisphere 28.3
2613 Female, age 94, left hemisphere 27.6
2764 Male, age 80, right hemisphere 26.9
Hippocampus, CA1
nTPM: 30.3
2527 Male, age 74, both hemispheres 33.1
2082 Female, age 91, right hemisphere 31.1
2045 Male, age 76, both hemispheres 30.2
1873 Female, age 85, both hemispheres 29.9
2749 Male, age 80, left hemisphere 27.0
Hippocampus, CA2
nTPM: 31.3
1940 Female, age 85, left hemisphere 33.1
2249 Male, age 74, both hemispheres 32.5
2113 Female, age 91, right hemisphere 31.9
2437 Female, age 94, left hemisphere 31.1
1963 Male, age 80, left hemisphere 30.4
1892 Male, age 76, both hemispheres 28.6
Hippocampus, CA3
nTPM: 31.0
2436 Male, age 74, both hemispheres 36.3
1891 Female, age 85, both hemispheres 33.4
1867 Male, age 76, both hemispheres 30.6
2861 Female, age 67, both hemispheres 29.6
2137 Male, age 80, left hemisphere 28.7
2620 Female, age 94, left hemisphere 27.6
Parahippocampal cortex
nTPM: 30.5
2692 Male, age 74, both hemispheres 34.4
2018 Male, age 76, both hemispheres 32.8
1990 Female, age 91, right hemisphere 31.4
2250 Female, age 67, right hemisphere 31.2
2693 Female, age 94, both hemispheres 30.2
2245 Female, age 91, both hemispheres 29.9
1933 Female, age 85, both hemispheres 29.4
1850 Male, age 80, both hemispheres 29.3
2622 Female, age 67, right hemisphere 29.0
2532 Female, age 72, left hemisphere 27.5
Perirhinal gyrus
nTPM: 28.9
2848 Male, age 76, right hemisphere 29.3
1847 Female, age 91, left hemisphere 29.1
2521 Female, age 94, right hemisphere 28.9
1841 Female, age 85, right hemisphere 28.8
1794 Male, age 80, right hemisphere 28.6
Subiculum
nTPM: 34.3
2042 Male, age 76, both hemispheres 37.1
2729 Female, age 91, right hemisphere 36.5
2619 Male, age 74, both hemispheres 34.4
2438 Female, age 94, left hemisphere 33.7
1901 Male, age 80, both hemispheres 33.2
1977 Female, age 85, both hemispheres 30.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.0
Samples: 197

Max nTPM: 72.5
Min nTPM: 23.6
Std nTPM: 9.8
Median nTPM: 40.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 72.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 69.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 66.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 65.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 65.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 64.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 63.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 60.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 60.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 60.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 59.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.4
FF:10153-102I9 76 years, female 15.2
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.9
Samples: 4

Max nTPM: 35.1
Min nTPM: 27.0
Sample A Female 35.1
Sample B Female 27.9
Sample C Male 33.6
Sample D Male 27.0
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 29.6
Min nTPM: 20.4
Sample A Female 29.6
Sample B Female 23.4
Sample C Male 27.5
Sample D Male 20.4
Subiculum
nTPM: 30.4
Samples: 4

Max nTPM: 34.7
Min nTPM: 27.4
Sample A Female 34.7
Sample B Female 27.4
Sample C Male 29.0
Sample D Male 30.4
Ventral hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 39.0
Min nTPM: 27.3
Sample A Female 39.0
Sample B Female 27.3
Sample C Male 29.4
Sample D Male 27.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 21.7
Min nTPM: 16.1
Sample A Male 21.7
Sample B Male 16.3
Sample C Female 20.6
Sample D Female 16.1
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 20.0
Min nTPM: 17.6
Sample A Male 20.0
Sample B Male 19.9
Sample C Female 17.6
Sample D Female 19.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
68924455 Antisense, RP_050303_02_D05, Mouse strain C57BL/6J (56 days, male) 0.9

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